Difference between revisions of "Main Page"

From Plant Ontology Wiki
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'''[[Links to sites using the PO]]'''
 
'''[[Links to sites using the PO]]'''
 
== Ontology Annotations ==
 
== Ontology Annotations ==
 
''' Formats of the Ontology Files'''
 
* OBO format: The Plant Ontology follows the Gene Ontology's: [http://www.geneontology.org/GO.format.obo-1_2.shtml OBO Flat File Format Specification, version 1.2]
 
* OWL Format: The Plant Ontology is also available in Web Ontology Language (OWL) as rdf/xhml, which can be viewed and editing using [http://protege.stanford.edu Protege] software.
 
 
  
 
''' Preparation and Display of Annotation Files '''
 
''' Preparation and Display of Annotation Files '''

Revision as of 21:46, 18 October 2012

Welcome to the Plant Ontology Wiki


Plant Ontology Consortium Resources

About the Plant Ontology project

PO Releases and Database Updates

Visit the pages below for specific details on each release

Next Scheduled Release:

Tentatively scheduled for: Early November Release_19

Release #18 July 2012 Release

Release #17 April 2012 Release Page

Release #16 October 2011 Release Page

Release #15 May 2011 Release Page

Release #14 Jan 2011 Release Page

Release #13 October 2010 Release Page

POC Meetings

POC weekly meetings

Minutes of the Plant Ontology Consortium meetings

POC workshops and other meetings

POC_Meeting and Workshop June 29th and 30th, 2010 Corvallis, OR

POC Meeting and Workshop Nov 4th to 6th, 2010; NYBG, Bronx, NY

POC Meeting at NYBG; Sept 10th-11th, 2011

Wood_anatomy_ontology_meeting,_2012_at_NYBG,_agenda

Plant_Ontology_and_Crop_Annotation_Workshop_OSU_2012

POC Technical Issues Page

POC Collaborators and Affiliated Ontologies

ABRC

AgBase

Agron-Omics

Angiosperm Phylogeny Web Glossary

BAR

Cell Ontology

Cosmoss-_Physcomitrella

CRIBI- Grape Genomics

Flora of North America- FNA

Gene Ontology

Genome Database for Rosaceae

Gramene

GCP Crop Ontology

Live Plant Image Group

MaizeGDB

MorphoBank

Minimal Anatomical Terminology

NASC Nottingham Arabidopsis Stock Centre

OBO Foundry

Ontology for Biomedical Investigations

Oryzabase

Phenoscape

Plant Disease Ontology

Plant Phenotype Ontology

PlantSystematics.org

Plant Trait Ontology

PLEXdb

Population and Community Ontology

Solanaceae Genome network (SGN)

SoyBase

SSWAP

TraitNet

Wood Anatomy

* New *

Wheat Gene Catalog

JSTOR Herbarium Annotations

Potential new collaborators:

eMonocot

CoGe

Cycad Pages

Oregon Flora Project

MASISH- Maize Seed In Situ Hybridization database

International Society of Root Research

List of user group contacts


Links to sites using the PO

Ontology Annotations

Preparation and Display of Annotation Files


PO Annotations page links to Category:Annotations [1]

Outreach

Publications and Other Resources

  • Related Publications References and citations of interest on ontology, published by the PO consortium and collaborators.

If you are aware of a publication that is not on this list, please send us the citation and we will add it.

Plant Ontology Development Guidelines

Developers style guide

Descriptions of relations in the PO

Principles, Rationales and Key Organizing Rules of the PO

The first three pages listed below are not up to date.


Ontology accessions


DBXrefs


Requesting new ontology terms, or changes to existing terms

Other

Calendar (POC outreach schedule)

Wiki meta links