Difference between revisions of "Jan 2011 Release Page"

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* elongation zone (PO:0020125) (replaced by root elongation zone (PO:0025181) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=1646b1294179675&view=assoc&query=PO%3A0020125&search_constraint=terms ~40 annotations, all from ''Arabidopsis'']
 
* elongation zone (PO:0020125) (replaced by root elongation zone (PO:0025181) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=1646b1294179675&view=assoc&query=PO%3A0020125&search_constraint=terms ~40 annotations, all from ''Arabidopsis'']
  
−
primary root elongation zone
+
*papillae (PO:0002001) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=1797b1294180398&view=assoc&query=PO%3A0002001&search_constraint=terms 6 annotations from ''Arabidopsis'']
−
def: "A zone of small, densely cytoplasmic cells that are dividing and expanding in size located behind the zone of cell division in the primary root." [TAIR:ki]
 
−
is_a: PO:0020125 ! elongation zone
 
−
relationship: part_of PO:0020127 ! primary root
 
  
  
−
''The term that was obsoleted was elongation zone (PO:0020125). Now that I see the definitions, I think primary root elongation zone and lateral root elongation zone should be obsoleted for the same reason. I will obsolete them and put in replacement terms''
+
* unicellular trichome branch??
  
−
* papilla? (do you mean papillae (PO:0002001)?? does not seem to be obsoleted??.
+
''trichome branch (PO:0008031) was obsoleted and replaced by multicellular trichome branch cell in PO plus unicellular trichome branch in GO.''
−
def: "A soft protuberance on an epidermal cell of the stigma." [ISBN:0471245208]
 
−
subset: reference?
 
  
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''It was papillae that was obsoleted. I just checked the editor's file, and it has been obsoleted.''
 
  
−
* unicellular trichome branch??
+
*primary root elongation zone (PO:0003003)
−
 
+
def: "A zone of small, densely cytoplasmic cells that are dividing and expanding in size located behind the zone of cell division in the primary root."
−
''trichome branch (PO:0008031) was obsoleted and replaced by multicellular trichome branch cell in PO plus unicellular trichome branch in GO.''
+
is_a: PO:0020125 ! elongation zone
 +
relationship: part_of PO:0020127 ! primary root
  
 
==List of New Terms==
 
==List of New Terms==

Revision as of 22:34, 4 January 2011

This page is under construction.....


Summary of Changes to PO Jan2011

List of Obsoleted Terms

  • floral stomatal complex (PO:0008044) No Annotations


  • unicellular trichome branch??

trichome branch (PO:0008031) was obsoleted and replaced by multicellular trichome branch cell in PO plus unicellular trichome branch in GO.


  • primary root elongation zone (PO:0003003)

def: "A zone of small, densely cytoplasmic cells that are dividing and expanding in size located behind the zone of cell division in the primary root." is_a: PO:0020125 ! elongation zone relationship: part_of PO:0020127 ! primary root

List of New Terms

  • plant anatomical entity (PO:0025131): An anatomical entity (CARO:0000000) that is or was part of a plant.
  • plant anatomical space (PO:0025117): An anatomical space (CARO:0000005) that is part of a plant.
  • reproductive shoot system (PO:0025082): A shoot system in the sporophytic phase that has as part at least one sporangium.
  • gynoecium ridge (PO:0025088): A gynoecium in the early stages of development, characterized as a ridge on the abaxial surface of the floral meristem that develops from a gynoecium primordium.
  • dehiscence zone (PO:0025092): A portion of plant tissue that is part of a plant structure and consists of a narrow band of cells that undergoes dehiscence upon maturation of the structure.
  • pollen tube cell (PO:0025195): A plant cell that develops from a vegetative cell and forms a tubular extension of the pollen grain. [source: POC:rw]

Comment: Carries the male gametes to into or near the ovule. May be branched in gymnosperms. See GO for pollen tube and pollen tube tip. (need to add GO term ids)

  • papilla cell (PO:0025166): An epidermal pavement cell with a short protuberance. [source: POC:curators]

Comment: See GO for the subcellular component papilla.(need to add GO term ids)

  • stigma papilla cell (PO:0025168):
  • leaf papilla cell (PO:0025167):
  • archegonium egg cell
  • embryo sac egg cell
  • antheridium sperm cell
  • pollen sperm cell
  • primordium (PO:0025127)
  • phyllome primordium
  • trichome
  • multicellular trichome
  • trichome cell
  • multicellular trichome branch
  • multicellular trichome branch cell
  • phyllome trichome
  • bract trichome
  • carpel trichome
  • thorn
  • prickle
  • spine
  • root parenchyma (PO:0025095): A portion of parenchyma tissue that is part of a root system.
  • root elongation zone (PO:0025181): (because definition of elongation zone was incorrect and added new term, new id)
  • differentiation zone
  • elongation zone
  • plant axis differentiation zone (PO:0025119)
  • stem internode differentiation zone (PO:0008042)
  • plant axis elongation zone (PO:0025180).
  • stomatal complex
  • phyllome stomatal complex
  • leaf stomatal complex
  • root elongation zone (PO:0025181)

List of Renamed Terms

  • Secretory trichome was renamed glandular trichome
  • seed trichome was made the primary name for PO:0004511, (changed seed hair to exact synonym, added pubescence as related synonym)
  • root differentiation zone (PO:0020135; renaming of old term differentiation zone)
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