Difference between revisions of "ABRC"

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Contact:  Jelena Brkljacic (brkljacic.1@osu.edu)
 
Contact:  Jelena Brkljacic (brkljacic.1@osu.edu)
  
Background: We received a list of of ABRC stocks with associated phenotypes, by email, from JB (ABRC Phenotypes for Pankaj (JB 8-24-11).xlsx).  
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Background: We received a list of of ABRC stocks with associated phenotypes, by email, from JB (ABRC Phenotypes for Pankaj (JB 8-24-11).xlsx). From JB: "They are all single mutants; 15 have a term "leaf" within their phenotype; 13 have a term "flower"; 18 have "root"; 12 "seed" and 9 "seedling".
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Created Dropbox folder: ABRC Phenotype annotations
 
Created Dropbox folder: ABRC Phenotype annotations
  
From JB: "They are all single mutants; 15 have a term "leaf" within their phenotype; 13 have a term "flower"; 18 have "root"; 12 "seed" and 9 "seedling".  
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Goal: a collaboration with ABRC on annotating their phenotype descriptors with PO, PATO and TO.
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11-25-09: PJ asked CM about using [http://www.hindawi.com/journals/cfg/2004/805603/abs/ Obol]:
  
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See: Mungall CJ (2004) Obol: Integrating Language and Meaning in Bio-Ontologies. Comparative and Functional Genomics 5: 509–520
  
  

Revision as of 19:51, 29 November 2012

Arabidopsis Biological Resource Center ABRC homepage

The ABRC collects, preserves, reproduces and distributes diverse seed and other stocks of Arabidopsis thaliana and related species.

Contact: Jelena Brkljacic (brkljacic.1@osu.edu)

Background: We received a list of of ABRC stocks with associated phenotypes, by email, from JB (ABRC Phenotypes for Pankaj (JB 8-24-11).xlsx). From JB: "They are all single mutants; 15 have a term "leaf" within their phenotype; 13 have a term "flower"; 18 have "root"; 12 "seed" and 9 "seedling".


Created Dropbox folder: ABRC Phenotype annotations

Goal: a collaboration with ABRC on annotating their phenotype descriptors with PO, PATO and TO.


11-25-09: PJ asked CM about using Obol:

See: Mungall CJ (2004) Obol: Integrating Language and Meaning in Bio-Ontologies. Comparative and Functional Genomics 5: 509–520



Ontologies at NASC

Ontology browser at NASC