Difference between revisions of "List of user group contacts"

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Announcements sent to user groups
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===Collaborators and User Groups===
  
* TAIR email: curator@arabidopsis.org  
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*[http://www.arabidopsis.org/ TAIR]  email: curator@arabidopsis.org
 
 
* NASC sent to: email: bioinfo@arabidopsis.info
 
  
 +
*[http://arabidopsis.info/ NASC]  send to: email: bioinfo@arabidopsis.info
 
(not really clear who to send it to here)
 
(not really clear who to send it to here)
  
* Gramene email: gramene@gramene.org  
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*[http://www.gramene.org/plant_ontology/ Grameneemail: gramene@gramene.org
  
* MaizeGDB Carolyn Lawrence, Mary Schaeffer, Jack Gardiner. No generic contact address  
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*[http://www.maizegdb.org/ MaizeGDB] Carolyn Lawrence, Mary Schaeffer, Jack Gardiner. No generic contact address
  
* VirtualPlant Posted to their "contact us" form  
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*[http://virtualplant.bio.nyu.edu/cgi-bin/vpweb2/ VirtualPlant]  Post to their [http://virtualplant.bio.nyu.edu/cgi-bin/vpweb2/ "contact us" form]
  
* SoyBase Sent to: Rex Nelson and posted to their "contact us" form.  
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*[http://soybase.org  SoyBase] Send to: Rex Nelson and post to their [http://soybase.org/include/antispam.php "contact us"] form.
  
* Genevestigator Sent to:support@genevestigator.com  
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*[https://www.genevestigator.com/gv/index.jsp Genevestigator] Send to:support@genevestigator.com
 
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* SGN Sent to: Lukas Mueller + Naama Menda and posted to their "contact us"
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*[http://solgenomics.net/ SGN]  Send to: Lukas Mueller + Naama Menda and posted to their [http://solgenomics.net/tools/contact.pl "contact us"]
 
 
* [http://www.shigen.nig.ac.jp/rice/oryzabase/top/top.jsp OryzaBase] Sent to: Yukiko Yamazaki and posted on their "contact us" page.
 
  
* PlantTribes Sent to: PI: Claude dePamphilis (Penn State) cwd3@psu.edu
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*[http://www.shigen.nig.ac.jp/rice/oryzabase/top/top.jsp OryzaBase] Send to: Yukiko Yamazaki and posted on their [http://www.shigen.nig.ac.jp/rice/oryzabase/top/contactUs.jsp "contact us"] page.
  
* TraitNet Sent to coordinators Farshid Ahrestani (fa2260@columbia.edu) and Dan Bunker (dbunker@njit.edu)
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*[http://fgp.huck.psu.edu/tribedb/index.pl PlantTribes] Send to: PI: Claude dePamphilis (Penn State) cwd3@psu.edu
  
* CIMMYT, Mexico Generation Challenge Program Sent to: Rosemary Shretha
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*[http://www.columbia.edu/cu/traitnet/index.html TraitNet]  Send to coordinators Farshid Ahrestani (fa2260@columbia.edu) and Dan Bunker (dbunker@njit.edu)
  
* BRENDA Sent to:project leader Prof. Dr. Dietmar Schomburg
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* [http://apps.cimmyt.org/english/wpp/gen_res/index.cfm CIMMYT, Mexico]  [http://www.generationcp.org/ Generation Challenge Program] Sent to: Rosemary Shrestha
  
* UniProt Posted on their "contact us" page
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*[http://www.brenda-enzymes.org/ BRENDA] Send to:project leader  [http://www.brenda-enzymes.org/images/email_dschomburg.png Prof. Dr. Dietmar Schomburg]
  
* BAR Sent to Nicholas Provert and Rohan Patel
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*[http://www.uniprot.org/ UniProt]  Post on their [http://www.uniprot.org/contact "contact us"] page
  
Others:?
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*[http://www.bar.utoronto.ca/ BAR] Send to Nicholas Provert and Rohan Patel
  
OBI- Is Helen Parkinson on the mailing list? - not on po-dev
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'''Others and Lists'''
  
Cell Ontology- Already gone to Terry and Alex
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*OBI- Is Helen Parkinson on the mailing list? - not on po-dev
  
obo-discuss@lists.sourceforge.net (OBO-Foundry)
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*Cell Ontology- send to Terry and Alex- on Po-announce
  
GO Friends list- yes
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*obo-discuss@lists.sourceforge.net (OBO-Foundry)
  
Trish Whetzel and BioPortal- BS also mentioned contacting her as well. Laurel will send it to her
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*GO Friends list- yes
  
===Announcements sent to user groups===
+
*Trish Whetzel and BioPortal-
  
*[http://www.arabidopsis.org/ TAIR]  email: curator@arabidopsis.org
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Rice Enet and Rice Net lists - (through Oryzabase rice-net@chanko.lab.nig.ac.jp)
  
*[http://arabidopsis.info/ NASC] sent to: email: bioinfo@arabidopsis.info
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Medicago [http://www.medicago.org/genome/ Medicago]  
(not really clear who to send it to here)
 
  
*[http://www.gramene.org/plant_ontology/ Grameneemail: gramene@gramene.org
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[http://lis.comparative-legumes.org/lis/ Legume Information Systemlis_feedback@ncgr.org
  
*[http://www.maizegdb.org/ MaizeGDB] Carolyn Lawrence, Mary Schaeffer, Jack Gardiner.  No generic contact address
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Arabidopsis list?
  
*[http://virtualplant.bio.nyu.edu/cgi-bin/vpweb2/ VirtualPlant]  Posted to their [http://virtualplant.bio.nyu.edu/cgi-bin/vpweb2/ "contact us" form]
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maize list?
  
*[http://soybase.org  SoyBase] Sent to: Rex Nelson and posted to their [http://soybase.org/include/antispam.php "contact us"] form.
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brachypodium
  
*[https://www.genevestigator.com/gv/index.jsp Genevestigator] Sent to:support@genevestigator.com
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GO List
 
 
*[http://solgenomics.net/ SGN]  Sent to: Lukas Mueller + Naama Menda and posted to their [http://solgenomics.net/tools/contact.pl "contact us"]
 
  
*[http://www.shigen.nig.ac.jp/rice/oryzabase/top/top.jsp OryzaBase] Sent to: Yukiko Yamazaki and posted on their [http://www.shigen.nig.ac.jp/rice/oryzabase/top/contactUs.jsp "contact us"] page.
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Graingenes
  
*[http://fgp.huck.psu.edu/tribedb/index.pl PlantTribes] Sent to: PI: Claude dePamphilis (Penn State) cwd3@psu.edu
 
  
*[http://www.columbia.edu/cu/traitnet/index.html TraitNet]  Sent to coordinators Farshid Ahrestani (fa2260@columbia.edu) and Dan Bunker (dbunker@njit.edu)
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GDR Rosacea
  
* [http://apps.cimmyt.org/english/wpp/gen_res/index.cfm CIMMYT, Mexico] [http://www.generationcp.org/ Generation Challenge Program] Sent to: Rosemary Shretha
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Others:
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* Brent Mishler, UC Berkeley, USA, [http://ucjeps.berkeley.edu/people/mishler.html Brent Mishler] (bmishler at berkeley.edu)
  
*[http://www.brenda-enzymes.org/ BRENDA] Sent to:project leader  [http://www.brenda-enzymes.org/images/email_dschomburg.png Prof. Dr. Dietmar Schomburg]
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Expertise: systematics, evolution, and ecology of bryophytes
  
*[http://www.uniprot.org/ UniProt]  Posted on their [http://www.uniprot.org/contact "contact us"] page
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* Bill Buck (NYBG) [http://www.nybg.org/science/scientist_profile.php?id_scientist=5 William Buck] (bbuck at nybg.org)
  
*[http://www.bar.utoronto.ca/ BAR] Sent to Nicholas Provert and Rohan Patel
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Expertise: Moss systematics, pleurocarpous mosses, moss structural diversity
  
'''Others:?'''
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* Barbara Crandall-Stotler, Department of Plant Biology Southern Illinois University [http://bryophytes.plant.siu.edu/index.html Bryophytes at SIU, home] (crandall at plant.siu.edu)
  
OBI- Is Helen Parkinson on the mailing list? - not on po-dev
+
Expertise: liverworts, apical growth
  
Cell Ontology- Already gone to Terry and Alex
+
* Bernard Goffinet, University of Connecticut [http://www.eeb.uconn.edu/people/goffinet/ Goffinet Lab] (bernard.goffinet at uconn.edu)
  
obo-discuss@lists.sourceforge.net (OBO-Foundry)
+
Expertise: molecular systematics of bryophytes and lichens
  
GO Friends list- yes
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* Scott Schuette (Southern Illinois University) [http://bryophytes.plant.siu.edu/scott.html Bryophytes at SIU, Schuette] (swschuette at gmail.com)
  
Trish Whetzel and BioPortal- ''BS also mentioned contacting her as well.  Laurel will send it to her''
+
(will present talk on Physco bioinformatics at our symposium at the IBC)

Latest revision as of 18:56, 20 June 2011

Collaborators and User Groups

  • TAIR email: curator@arabidopsis.org
  • NASC send to: email: bioinfo@arabidopsis.info

(not really clear who to send it to here)

  • MaizeGDB Carolyn Lawrence, Mary Schaeffer, Jack Gardiner. No generic contact address
  • PlantTribes Send to: PI: Claude dePamphilis (Penn State) cwd3@psu.edu
  • TraitNet Send to coordinators Farshid Ahrestani (fa2260@columbia.edu) and Dan Bunker (dbunker@njit.edu)
  • BAR Send to Nicholas Provert and Rohan Patel

Others and Lists

  • OBI- Is Helen Parkinson on the mailing list? - not on po-dev
  • Cell Ontology- send to Terry and Alex- on Po-announce
  • obo-discuss@lists.sourceforge.net (OBO-Foundry)
  • GO Friends list- yes
  • Trish Whetzel and BioPortal-

Rice Enet and Rice Net lists - (through Oryzabase rice-net@chanko.lab.nig.ac.jp)

Medicago Medicago

Legume Information System lis_feedback@ncgr.org

Arabidopsis list?

maize list?

brachypodium

GO List

Graingenes


GDR Rosacea

Others:

  • Brent Mishler, UC Berkeley, USA, Brent Mishler (bmishler at berkeley.edu)

Expertise: systematics, evolution, and ecology of bryophytes

Expertise: Moss systematics, pleurocarpous mosses, moss structural diversity

  • Barbara Crandall-Stotler, Department of Plant Biology Southern Illinois University Bryophytes at SIU, home (crandall at plant.siu.edu)

Expertise: liverworts, apical growth

  • Bernard Goffinet, University of Connecticut Goffinet Lab (bernard.goffinet at uconn.edu)

Expertise: molecular systematics of bryophytes and lichens

(will present talk on Physco bioinformatics at our symposium at the IBC)