Difference between revisions of "Jan 2011 Release Page"

From Plant Ontology Wiki
Jump to navigationJump to search
Line 5: Line 5:
 
==List of Obsoleted Terms==
 
==List of Obsoleted Terms==
 
* pollen tube (PO:0006345) [http://www.plantontology.org/amigo/go.cgi?session_id=5689b1294171797&view=assoc&search_constraint=terms&query=PO:0006345&page=94 97 pages of annotations:all from ''Arabidopsis'']
 
* pollen tube (PO:0006345) [http://www.plantontology.org/amigo/go.cgi?session_id=5689b1294171797&view=assoc&search_constraint=terms&query=PO:0006345&page=94 97 pages of annotations:all from ''Arabidopsis'']
 +
 
* pollen tube tip (PO:0000028) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=8476b1294171984&view=assoc&query=PO%3A0000028&search_constraint=terms 9 annotations from ''Arabidopsis'']
 
* pollen tube tip (PO:0000028) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=8476b1294171984&view=assoc&query=PO%3A0000028&search_constraint=terms 9 annotations from ''Arabidopsis'']
  
Line 10: Line 11:
 
* root hair tip (PO:0000029)  [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=4940b1294172538&view=assoc&query=PO%3A0000029&search_constraint=terms 1 annotation from ''Arabidopsis'']
 
* root hair tip (PO:0000029)  [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=4940b1294172538&view=assoc&query=PO%3A0000029&search_constraint=terms 1 annotation from ''Arabidopsis'']
  
 +
* floral epidermis (PO:0008043) [http://www.plantontology.org/amigo/go.cgi?taxid=all&species_db=all&ev_code=aca&show_associations=direct&session_id=158b1294173248&view=assoc&query=PO%3A0008043&search_constraint=terms 1 annotation from ''Arabidopsis'']
  
  
 +
* root elongation zone (because definition was incorrect and added new term with same name, new id)?  Not found on live site?
  
* root elongation zone (because definition was incorrect and added new term with same name, new id)
 
* floral epidermis
 
 
* floral stomatal complex
 
* floral stomatal complex
 
* papilla  
 
* papilla  

Revision as of 20:36, 4 January 2011

This page is under construction.....


Summary of Changes to PO Jan2011

List of Obsoleted Terms


  • root elongation zone (because definition was incorrect and added new term with same name, new id)? Not found on live site?
  • floral stomatal complex
  • papilla

(do you mean papillae (PO:0002001)?? does not seem to be obsoleted??. def: "A soft protuberance on an epidermal cell of the stigma." [ISBN:0471245208] subset: reference

  • unicellular trichome branch??

List of New Terms

  • plant anatomical entity (PO:0025131): An anatomical entity (CARO:0000000) that is or was part of a plant.
  • plant anatomical space (PO:0025117): An anatomical space (CARO:0000005) that is part of a plant.
  • reproductive shoot system (PO:0025082): A shoot system in the sporophytic phase that has as part at least one sporangium.
  • gynoecium ridge (PO:0025088): A gynoecium in the early stages of development, characterized as a ridge on the abaxial surface of the floral meristem that develops from a gynoecium primordium.
  • dehiscence zone (PO:0025092): A portion of plant tissue that is part of a plant structure and consists of a narrow band of cells that undergoes dehiscence upon maturation of the structure.
  • pollen tube cell (PO:0025195): A plant cell that develops from a vegetative cell and forms a tubular extension of the pollen grain. [source: POC:rw]

Comment: Carries the male gametes to into or near the ovule. May be branched in gymnosperms. See GO for pollen tube and pollen tube tip. (need to add GO term ids)

  • papilla cell (PO:0025166): An epidermal pavement cell with a short protuberance. [source: POC:curators]

Comment: See GO for the subcellular component papilla.(need to add GO term ids)

  • stigma papilla cell (PO:0025168):
  • leaf papilla cell (PO:0025167):
  • archegonium egg cell
  • embryo sac egg cell
  • antheridium sperm cell
  • pollen sperm cell
  • primordium (PO:0025127)
  • phyllome primordium
  • trichome
  • multicellular trichome
  • trichome cell
  • multicellular trichome branch
  • multicellular trichome branch cell
  • phyllome trichome
  • bract trichome
  • carpel trichome
  • thorn
  • prickle
  • spine
  • root parenchyma (PO:0025095): A portion of parenchyma tissue that is part of a root system.
  • root elongation zone (because definition was incorrect and added new term with same name, new id)
  • differentiation zone
  • elongation zone
  • plant axis differentiation zone (PO:0025119)
  • stem internode differentiation zone (PO:0008042)
  • plant axis elongation zone (PO:0025180).
  • stomatal complex
  • phyllome stomatal complex
  • leaf stomatal complex

List of Renamed Terms

  • Secretory trichome was renamed glandular trichome
  • seed trichome was made the primary name for PO:0004511, (changed seed hair to exact synonym, added pubescence as related synonym)
  • root differentiation zone (PO:0020135; renaming of old term differentiation zone)