Difference between revisions of "Cosmoss- Physcomitrella"
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| − | ==Initial meeting | + | =Adding Physcomitrella annotations to PO terms= |
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| + | [[PO-Physco Webex Meeting July 18th 2011- Annotations]] | ||
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| + | [[Physco growth conditions mapped to EO]] | ||
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| + | [[Questions and Issues Nov,2011]] | ||
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| + | Helpful link to [https://www.cosmoss.org/physcome_project/wiki/CGI Cosmoss gene ID wiki] | ||
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| + | Physco on [http://www.phytozome.net/physcomitrella.php Phytozome] | ||
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| + | Go to:[[Background info on Physco biology and culture]] | ||
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| + | Link to: [http://moss.nibb.ac.jp/ Japanese Physcomitrella site] | ||
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| + | =Initial meeting date: Sept 2010= | ||
* We have been contacted by [http://plantco.de/ Stefan Rensing], University of Freiburg, Germany | * We have been contacted by [http://plantco.de/ Stefan Rensing], University of Freiburg, Germany | ||
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Also see [http://www.cosmoss.org/ Cosmoss], the ''Physcomitrella patens'' resource site. | Also see [http://www.cosmoss.org/ Cosmoss], the ''Physcomitrella patens'' resource site. | ||
| − | ==May 2011 Release includes Physcomitrella terms | + | [[Background info on Physco biology and culture]] |
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| + | ==PO_Physco Webex June 21, 2011== | ||
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| + | May 2011 Release includes new Physcomitrella terms | ||
See: [[May_2011_Release_Page]] | See: [[May_2011_Release_Page]] | ||
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June 21st, 2011 PO-Physco Webinar: | June 21st, 2011 PO-Physco Webinar: | ||
| − | [[Plant_Ontology_Webinar-_May_2011_release]] | + | For notes from the meeting: [[Plant_Ontology_Webinar-_May_2011_release]] |
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| − | + | ==Other== | |
| − | [[ | + | [[Moss 2011 Meeting- PO presentation]] |
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| − | + | [[Category:Collaborations]] | |
Latest revision as of 23:40, 5 December 2012
Adding Physcomitrella annotations to PO terms
PO-Physco Webex Meeting July 18th 2011- Annotations
Physco growth conditions mapped to EO
Helpful link to Cosmoss gene ID wiki
Physco on Phytozome
Go to:Background info on Physco biology and culture
Link to: Japanese Physcomitrella site
Initial meeting date: Sept 2010
- We have been contacted by Stefan Rensing, University of Freiburg, Germany
re: setting up an ontology for bryophytes with a focus on the model moss Physcomitrella patens.
Ramona and Dennis responded to him with an explanation of why we chose the current structure. He responded:
'We will aim to setup bryophyte terms with regard to the new structure and (if possible) suggest terms that are broad enough to cover all land plants in the process.'
'FYI, the current, but now obsolete, PO-MO term mapping is at MossOntology wiki'
This site has a list of moss tissue and cell types, as well as life cycle/developmental stages that we could use a a guide for adding new terms.
Link to the thread on po-discuss mailing list: http://mailman.cgrb.oregonstate.edu/pipermail/po-discuss/2010-September/000035.html
Also see Cosmoss, the Physcomitrella patens resource site.
Background info on Physco biology and culture
PO_Physco Webex June 21, 2011
May 2011 Release includes new Physcomitrella terms
-Added about 80 terms to the PO to accommodate the moss ontology terms
June 21st, 2011 PO-Physco Webinar:
For notes from the meeting: Plant_Ontology_Webinar-_May_2011_release
