Difference between revisions of "New terms and obsolete terms July 2012 Release"

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=New terms - PAE=
 
=New terms - PAE=
  
−
phyllome lamina vein (PO:0025348)
+
androecium primordium (PO:0025478)
 +
 
 +
basal root primordium (PO:0025479)
 +
 
 +
bract anlagen (PO:0025482)
 +
 
 +
bract primordium (PO:0025487)
 +
 
 +
cardinal part of multi-tissue plant structure (PO:0025498)
  
−
tuber root (PO:0025476)
+
collective plant structure (PO:0025497)
  
 
floral structure primordium (PO:0025477)
 
floral structure primordium (PO:0025477)
  
−
androecium primordium (PO:0025478)
+
flower bract primordium (PO:0025488)
  
−
basal root primordium (PO:0025479)
+
inflorescence bract primordium (PO:0025489)
−
 
 
−
shoot-borne root primordium (PO:0025480)
 
  
 
leaflet primordium (PO:0025481)
 
leaflet primordium (PO:0025481)
  
−
bract anlagen (PO:0025482)
+
lodicule anlagen (PO:0025483)
  
−
lodicule anlagen (PO:0025483)
+
multi-tissue plant structure (PO:0025496)
  
−
petal anlagen (PO:0025484)
+
non-pericyclic lateral root (PO:0025495)
  
−
sepal anlagen (PO:0025485)
+
non-pericyclic lateral root primordium (PO:0025493)
  
−
stamen anlagen (PO:0025486)
+
ovarian ovule (PO:0025490)
  
−
bract primordium (PO:0025487)
+
ovuliferous scale ovule (PO:0025491)
  
−
flower bract primordium (PO:0025488)
+
pericyclic lateral root (PO:0025494)
  
−
inflorescence bract primordium (PO:0025489)
+
pericyclic lateral root primordium (PO:0025492)
  
−
ovarian ovule (PO:0025490)
+
petal anlagen (PO:0025484)
  
−
ovuliferous scale ovule (PO:0025491)
+
phyllome lamina vein (PO:0025348)
  
−
multi-tissue plant structure (MTPS) (PO:0025496): A plant structure (PO:0009011) that has as parts two or more portions of plant tissue (PO:0009007) of at least two different types and which through specific morphogenetic processes forms a single, distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types.
+
sepal anlagen (PO:0025485)
  
−
collective plant structure PO:0025497: A multi-tissue plant structure (PO:0025496) that is a proper part of a whole plant (PO:0000003) and includes two or more adjacent plant organs (PO:0009008), or cardinal organ parts (PO:0025001), along with any associated portions of plant tissue (PO:0009007).
+
shoot-borne root primordium (PO:0025480)
  
 +
stamen anlagen (PO:0025486)
  
−
cardinal part of multi-tissue plant structure (PO:0025498): A plant structure (PO:0009011) that is a proper part of a multi-tissue plant structure (PO:0025496) and includes portions of plant tissues (PO:0009007) of at least two different types.
+
tuber root (PO:0025476)
  
 
=Renamed terms - PAE=
 
=Renamed terms - PAE=
  
−
Changed name of auricle (PO:0020106) to leaf sheath auricle and synonym to leaf sheath ear,
+
auricle (PO:0020106) > leaf sheath auricle (changed synonym from ear to leaf sheath ear)
 +
 
 +
ovary (PO:0009072) > plant ovary
  
−
Added "plant" to names of ovary and ovule plus subtypes.
+
ovule (PO:0020003) > plant ovule
  
 
primary shoot (PO:0006341) > primary shoot system
 
primary shoot (PO:0006341) > primary shoot system
  
 +
collective plant structure (PO:0025007) > collective plant organ structure
  
−
Renamed the existing collective plant structure term and made it a child of new CPS,:
+
=New terms - PSDS=
−
collective plant organ structure (PO:0025007):  revised def'n: A collective plant structure (PO:0025497) composed of two or more cardinal organ parts (PO:0025001) from adjacent plant organs (PO:0009008) and any associated portions of plant tissue (PO:0009007).
 
  
−
=New terms - PSDS=
+
None for this release.
  
 
=Obsoleted terms=
 
=Obsoleted terms=
−
* [http://www.plantontology.org/amigo/go.cgi?view=assoc&search_constraint=terms&depth=0&query=PO:0004706&session_id=9414b1340041765&show_associations=list flower primordium (PO:0004706)] obsolete - consider flower apical meristem and consider floral structure primordium
+
* [http://www.plantontology.org/amigo/go.cgi?view=assoc&search_constraint=terms&depth=0&query=PO:0004706&session_id=9414b1340041765&show_associations=list flower primordium (PO:0004706)] obsolete -  
  
−
-this has 27 annotations
+
consider [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0000229&session_id=4460b1340041931 flower meristem] (PO:0000229) or [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0025477&session_id=5994b1340042120 floral structure primordium] (PO:0025477) instead.
  
 +
-this has 27 annotations, mostly from TAIR, one Gramene and one SGN
  
−
''Note there is no term 'flower apical meristem', but there is [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0000229&session_id=4460b1340041931 flower meristem] and [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0025477&session_id=5994b1340042120 floral structure primordium]
+
''Note:  [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0000229&session_id=4460b1340041931 flower meristem] and [http://dev.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0025477&session_id=5994b1340042120 floral structure primordium]
  
−
* adventitious root primordium (PO:0008038) - consider basal root primordium (PO:0025479) and consider shoot-borne root primordium (PO:0025480)
+
* [http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0008038&session_id=5040b1340042286 adventitious root primordium (PO:0008038)] - consider basal root primordium (PO:0025479) and consider shoot-borne root primordium (PO:0025480)
  
  

Latest revision as of 21:59, 2 July 2012

New terms - PAE

androecium primordium (PO:0025478)

basal root primordium (PO:0025479)

bract anlagen (PO:0025482)

bract primordium (PO:0025487)

cardinal part of multi-tissue plant structure (PO:0025498)

collective plant structure (PO:0025497)

floral structure primordium (PO:0025477)

flower bract primordium (PO:0025488)

inflorescence bract primordium (PO:0025489)

leaflet primordium (PO:0025481)

lodicule anlagen (PO:0025483)

multi-tissue plant structure (PO:0025496)

non-pericyclic lateral root (PO:0025495)

non-pericyclic lateral root primordium (PO:0025493)

ovarian ovule (PO:0025490)

ovuliferous scale ovule (PO:0025491)

pericyclic lateral root (PO:0025494)

pericyclic lateral root primordium (PO:0025492)

petal anlagen (PO:0025484)

phyllome lamina vein (PO:0025348)

sepal anlagen (PO:0025485)

shoot-borne root primordium (PO:0025480)

stamen anlagen (PO:0025486)

tuber root (PO:0025476)

Renamed terms - PAE

auricle (PO:0020106) > leaf sheath auricle (changed synonym from ear to leaf sheath ear)

ovary (PO:0009072) > plant ovary

ovule (PO:0020003) > plant ovule

primary shoot (PO:0006341) > primary shoot system

collective plant structure (PO:0025007) > collective plant organ structure

New terms - PSDS

None for this release.

Obsoleted terms

consider flower meristem (PO:0000229) or floral structure primordium (PO:0025477) instead.

-this has 27 annotations, mostly from TAIR, one Gramene and one SGN

Note: flower meristem and floral structure primordium



Back to July 2012 Release page.

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