Difference between revisions of "Goal 1. Anatomical Entities"

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==Tissue types related to wood==
 
==Tissue types related to wood==
====New term for sieve tube====
+
===portion of vascular tissue (PO:0009015)===
 +
====xylem (PO:0005352)====
 +
*vessel (PO:0025417)
  
'''sieve tube, proposed definition:''' A portion of phloem tissue that has as parts a series of sieve tube members arranged end to end and interconnected through sieve plates.
+
*primary xylem (PO:0005849)
 +
*protoxylem (PO:0000272)
 +
*metaxylem (PO:0000372)
  
Comment: A sieve plate (GO:0097218) is part of a sieve tube member.
+
*secondary xylem (PO:0005848)
 +
*growth ring (PO:0004514)
 +
*heartwood (PO:0004512)
 +
*sapwood (PO:0004513)
 +
 
 +
====phloem (PO:0005417)====
 +
*sieve tube (PO:0025416)
 +
 
 +
*primary phloem (PO:0006075)
 +
*protophloem (PO:0006077)
 +
*metaphloem (PO:0006076)
 +
*internal phloem (PO:0006216)
 +
 
 +
*secondary phloem (PO:0005043)
 +
*included phloem (PO:0004524)
 +
 
 +
===systems===
 +
*vascular system (PO:0000034)
 +
*axial system (PO:0025410)
 +
*ray system (PO:0025411)
 +
 
 +
===wood parenchyma==
  
 
==Cambia==
 
==Cambia==

Revision as of 12:37, 3 February 2012

This page is under construction.

Back to Wood_anatomy_ontology_meeting,_2012_at_NYBG,_agenda

Review existing anatomy/morphology terms and definitions

Cell types related to wood

tracheary elements

  • tracheary element (PO:0000290)
  • tracheid (PO:0000301)
  • vessel member (PO:0002003)

fiber cells

  • sclerenchyma cell (PO:0000077) - parent term
  • fiber cell (PO:0025407)
  • phloem fiber cell (PO:0004519)
  • xylem fiber cell (PO:0000274)
  • libriform fiber cell (PO:0004520)
  • fiber tracheid (PO:0000355)
  • gelatious fiber cell (PO:0025422)

sieve elements

  • sieve element (PO:0025406)
  • sieve cell (PO:0025415)
  • sieve tube member (PO:0000289)

New terms for GO

These subcellular components have been added to GO:

  • GO:0097217 sieve area
  • GO:0097218 sieve plate
  • GO:0097219 compound sieve plate
  • GO:0097220 simple sieve plate

Tissue types related to wood

portion of vascular tissue (PO:0009015)

xylem (PO:0005352)

  • vessel (PO:0025417)
  • primary xylem (PO:0005849)
  • protoxylem (PO:0000272)
  • metaxylem (PO:0000372)
  • secondary xylem (PO:0005848)
  • growth ring (PO:0004514)
  • heartwood (PO:0004512)
  • sapwood (PO:0004513)

phloem (PO:0005417)

  • sieve tube (PO:0025416)
  • primary phloem (PO:0006075)
  • protophloem (PO:0006077)
  • metaphloem (PO:0006076)
  • internal phloem (PO:0006216)
  • secondary phloem (PO:0005043)
  • included phloem (PO:0004524)

systems

  • vascular system (PO:0000034)
  • axial system (PO:0025410)
  • ray system (PO:0025411)

=wood parenchyma

Cambia

Develop list of anatomy/morphology terms that are missing

Do we need only wood-related terms, or other terms for woody plants?

Work on definitions of new terms