Difference between revisions of "Oryza sativa, IMP, Gramene Genes"

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----
 
----
 
Legends:  
 
Legends:  
#Gene ID: RAP-japan/IRGSP rice gene locus ID
+
#Gene ID: Gramene gene locus ID
 
#Cultivar: Nipponbare
 
#Cultivar: Nipponbare
 
#Gene data: Derived from supplementary tables ST2-ST25
 
#Gene data: Derived from supplementary tables ST2-ST25
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'''PO anatomy and growth stage annotations table:'''
 
'''PO anatomy and growth stage annotations table:'''
 
{| {{table}}
 
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Sample ID'''
+
| align="center" style="background:#f0f0f0;"|'''GR_gene:ID'''
| align="center" style="background:#f0f0f0;"|'''Dataset'''
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| align="center" style="background:#f0f0f0;"|'''Gene Name/Symbol'''
 
| align="center" style="background:#f0f0f0;"|'''Anatomy PO ID'''
 
| align="center" style="background:#f0f0f0;"|'''Anatomy PO ID'''
 
| align="center" style="background:#f0f0f0;"|'''growth stage PO ID'''
 
| align="center" style="background:#f0f0f0;"|'''growth stage PO ID'''
 
| align="center" style="background:#f0f0f0;"|'''growth stage PO ID'''
 
| align="center" style="background:#f0f0f0;"|'''growth stage PO ID'''
| align="center" style="background:#f0f0f0;"|''''''
+
| align="center" style="background:#f0f0f0;"|'''PMID:'''
 
| align="center" style="background:#f0f0f0;"|'''comments'''
 
| align="center" style="background:#f0f0f0;"|'''comments'''
 
|-
 
|-
 
| Anther at premeiosis stage, replicate 1_LMD sample||Pre_anther||PO:0009066||PO:0001004||PO:0007130||||
 
| Anther at premeiosis stage, replicate 1_LMD sample||Pre_anther||PO:0009066||PO:0001004||PO:0007130||||
 
|-
 
|-

Revision as of 12:09, 13 August 2013

This dataset was annotated as part of the Plant Phenotype Pilot Project


Legends:

  1. Gene ID: Gramene gene locus ID
  2. Cultivar: Nipponbare
  3. Gene data: Derived from supplementary tables ST2-ST25
  4. PO:annotations: best match to the sample description in the following tables. If required the PO annotations to growth stages were done to #both the organ/structure specific development stages and the whole plant growth stages. Every sample has PO whole plant growth stage #annotations.

PO anatomy and growth stage annotations table:

GR_gene:ID Gene Name/Symbol Anatomy PO ID growth stage PO ID growth stage PO ID PMID: comments
Anther at premeiosis stage, replicate 1_LMD sample Pre_anther PO:0009066 PO:0001004 PO:0007130