Ontology Resources

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Revision as of 19:02, 24 November 2008 by Shuly (talk | contribs) (New page: ==Internet resources and textbooks== *[http://www.mobot.org/MOBOT/Research/APweb/top/glossaryA_H.html Angiosperm Phylogeny Web Glossary] *Esau K. 1977: Anatomy of Seed Plants, 2nd Edition...)
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Internet resources and textbooks

  • Angiosperm Phylogeny Web Glossary
  • Esau K. 1977: Anatomy of Seed Plants, 2nd Edition. Wiley &Sons, Inc. ISBN:0471245208.
  • Gifford E. M. and. Foster A. S, 1989. Morphology and evolution of vascular plants, 3rd Edition. W.H. Freeman & Co., New York. ISBN:0716719460.
  • Kiesselbach, T. A. 1999: The Structure and Reproduction of Corn. 1999, 50th Anniversary Edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York. ISBN:0879695560.

List of projects working on ontologies

  • Controlled Vocabulary and Ontologies for cereal plants (Gramene)
  • Ontologies & Controlled Vocabularies for Gene Annotation of Arabidopsis (TAIR)
  • Ontologies and Controlled Vocabularies for Maize (Maize Mapping Project)
  • Ontologies to describe biochemical charateristics. Developed by Gene Ontology Consortium (GO)
  • Open Biological Ontology Foundry: an open community for sharing ontologies (OBO)
  • FAO's agricultural thesaurus (AGROVOC)
  • Agricultural Ontology Service Project (AOS)


  • Ontologies for data and knowledge sharing in biology: plant ROS signaling as a case study. [Abstract] [Full Text]
    Bioessays, 2006, Vol28(2): 199-210.
  • Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies. [Abstract] [Full Text]
    Genome research 2002,12: 1982-1991.
  • On the representation of gene function in genetic databases. by Michael Ashburner, ISMB 1998. [HTML]