PAG 2011 PO Workshop Invitees and Speakers

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Potential Speakers

contacted 12-8-10, 12/11/10:

-Stefan Rensing, University of Freiburg, Germany and Daniel Lang, see: Cosmoss, the Physcomitrella patens resource site. see: Non-seed plant workshop

-see Fruit and Nut workshop -Doreen Main (dorrie@wsu.edu) WSU, Nahla Bassil (attending), USDA-ARS Corvallis

Confirmed:

* MaizeGDB: Mary Schaeffer

*Claude dePamphilis and/or Jim Leebens-Mack Claude dePamphilis, Penn State University and/or Leebens-Mack, Jim (jleebensmack@psu.edu) - Project Manager Jim Leebens-Mack , University of Georgia, (also attending: Josh Der) Floral Genome Project

Invited People/Groups:

These groups will be represented at PAG:

  • Plex DB Roger P. Wise (sent through po-announce/dev list?)
  • Physcomitrella group: Stefan Rensing, University of Freiburg, Germany and Daniel Lang,

see: Cosmoss, the Physcomitrella patens resource site. see: Non-seed plant workshop

Doreen Main WSU, Nahla Bassil, USDA-ARS Corvallis

  • Qifa Zhang Rice Gene Expression Atlas paper qifazh@mail.hzau.edu.cn.
  • Cesare Gessler, ETH Zurich??
  • TAIR, Eva Huala, Kate Dreher (PMN), (Tanya Bernadini?) email: curator@arabidopsis.org
  • GrainGenes (curator@graingenes.org); David Matthews:(matthews@greengenes.cit.cornell.edu); Victoria Carollo (vcarollo@pw.usda.gov)
  • PlantTribes to: PI: Claude dePamphilis (Penn State) cwd3@psu.edu
  • Richard Bruskiewich,Bruskiewich IRRI International Rice Research Institute

(r.bruskiewich@cgiar.org)

"Annotation of Glycine max and Zea mays genomes"

-John B. Hays, Oregon Sate University (USA) (haysj@science.oregonstate.edu) "Evolutionarily conserved guardians of the plant genome: DNA mismatch repair and DNA-damage responses"

- Joshua Der jpd18@psu.edu

  • Generation Challenge Program, CIMMYT, Mexico: Rosemary Shrestha, Elizabeth Arnaud? see: GCP workshop
  • BAR: Nicholas Provart
  • OryzaBase: to: Yukiko Yamazaki (through mialing list po-dev/announce)
  • Chi-Ren Shyu (shyuc@missouri.edu), plant phenotypes workshop organizer

Confirmed Reg'ns:

  • Plant Ontology: Laurel, Ramona, Dennis, Justin Preece
  • Gramene- Palitha
  • Michelle Watt, CSIRO Plant Industry, Australia ( michelle.watt@csiro.au) "Genetic Improvement Of Wheat Root Architecture: Opportunities From Diverse Grasses With Sequenced Genomes" *Root Genomics Workshop
  • Claude dePamphilis, Penn State University and Jim Leebens-Mack, University of Georgia; Phylogenomics
  • Ryohei Terauchi, Iwate Biotechnology Research Center (Japan) (terauchi@ibrc.or.jp), "Large-scale EMS mutant screen and Next-Gen Sequencing: Rapid gene isolation in rice" Mutation Screening workshop
  • Nicholas Provart BAR
  • Anne Sturbaum, USDA-ARS, Soft Wheat Quality Lab, Wooster, Ohio

Also: Mary Schaeffer, Stefan Rensing

Others:

  • Genevestigator: contact? (support@genevestigator.com) Ontologies
  • Shoshi Kikuchi (skikuchi@nias.affrc.go.jp), National Institute of Agrobiological Sciences, Japan
  • Helen Parkinson- Array Express EBI
  • TraitNet: Coordinators Farshid Ahrestani (fa2260@columbia.edu) and Dan Bunker (dbunker@njit.edu)
  • BRENDA to:project leader Prof. Dr. Dietmar Schomburg
  • UniProt "contact us" page ? Rachel Huntley, someone doing plant annotations from SwissProt
  • ABRC abrc@arabidopsis.org Erich Grotewold: grotewold.1@osu.edu Jelena Brkljacic (Assistant Director)


  • Rosemary Shrestha- Generation Challenge Program
  • Lukas Mueller- SGN



Folks from IRRI:

  • Ruaraidh Sackville-Hamilton (mailto: R.Hamilton@cgiar.org ),
  • Richard Bruskiewich (mailto: r.bruskiewich@irri.org)
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