Arabidopsis-boyes-stages

Mapping of Arabidopsis growth stages defined by Boyes et al. vs Plant Ontology growth and development stages.

Stage Number	Approx.number of days *	Description	PO_ID	PO_TERM_NAME
0		Seed germination	PO:0007057	0 seed germination stage
0.1	3.0 (on plates)	Seed imbibition	PO:0007022	seed imbibition stage
0.5	4.3 (on plates)	Radicle emerges from seed coat	PO:0007015	radicle emergence stage
0.7	5.5 (on plates)	Hypocotyl and cotyledon emerge from seed coat	PO:0007043	hypocotyl emergence stage
1		Leaf development	PO:0007133	leaf production stage
1.0	6.0 (on plates)	Cotyledons fully open	PO:0007049	cotyledon emergence stage
1.02	10.3 (on plates) 12.5	2 rosette leaves are greater than 1 mm in length	PO:0007098	LP.02 two leaves visible stage
1.03	14.4 (on plates) 15.9	3 rosette leaves are greater than 1 mm in length	PO:0007106	LP.03 three leaves visible stage
1.04	16.5	4 rosette leaves are greater than 1mm in length	PO:0007115	LP.04 four leaves visible stage
1.05	17.7	5 rosette leaves are greater than 1mm	PO:0007065	LP.05 five leaves visible stage
1.06	18.4	6 rosette leaves are greater than 1mm	PO:0007123	LP.06 six leaves visible stage
1.07	19.4	7 rosette leaves are greater than 1mm	PO:0007063	LP.07 seven leaves visible stage
1.08	20	8 rosette leaves are greater than 1mm	PO:0007095	LP.08 eight leaves visible stage
1.09	21.1	9 rosette leaves are greater than 1mm	PO:0007101	LP.09 nine leaves visible stage
1.1	21.6	10 rosette leaves are greater than 1mm	PO:0007103	LP.10 ten leaves visible stage
1.11	22.2	11 rosette leaves are greater than 1mm	PO:0007116	LP.11 eleven leaves visible stage
1.12	23.3	12 rosette leaves are greater than 1mm	PO:0007064	LP.12 twelve leaves visible stage
1.13	24.8	13 rosette leaves are greater than 1mm	PO:0007083	LP.13 thirteen leaves visible stage
1.14	25.5	14 rosette leaves are greater than 1mm	PO:0007085	LP.14 fourteen leaves visible stage
3		Rosette Growth	PO:0007113	rosette growth stage
3.2	18.9	Rosette is 20% of final size	PO:0007081	early rosette growth stage
3.5	24	Rosette is 50% final size	PO:0007068	mid rosette growth stage
3.7	27.4	Rosette is 70% final size	PO:0007076	late rosette growth stage
3.9	29.3	Rosette growth is complete	PO:0007078	rosette growth complete stage
5		Inflorescence emergence	PO:0007041	inflorescence emergence stage
5.1	26	First flower buds are visible in the rosette, plant has not yet bolted	PO:0007006	IL.00 inflorescence just visible stage
6		Flower production	PO:0007016	whole plant flowering stage
6	31.8	First flower is open, petals are at 90 degree angle to the pistil	PO:0007026	FL.00 first flower(s) open stage
6.1	35.9	10% flowers to be produced are open	PO:0007026	FL.00 first flower(s) open stage
6.3	40.1	30% flowers to be produced are open	PO:0007034	FL.01 1/4 of flowers open stage
6.5	43.5	50 % flowers to be produced are open	PO:0007053	FL.02 1/2 of flowers open stage
6.9	49.4	Flowering complete, flowers are no longer produced.	PO:0007024	FL.04 end of flowering stage
8		Silique or fruit ripening. Seed pods become brown and then shatter.	PO:0007010	whole plant fruit ripening stage
8	48	First silique or seed pod shatters.	PO:0007036	beginning of whole plant fruit ripening stage
9		Whole Plant Senescence begins. Plant starts to lose, pigment becoming brownish.	PO:0007017	sporophyte senescent stage
9.7		Senescense complete	PO:0007017	sporophyte senescent stage