POC Conf. Call 8-18-10
POC meeting, Webex Conference Call; Date: Aug 18th, 2010 10am (PDT)
In attendance:
POC members:
Absent:
Collaborators:
Acceptance of the minutes from the 8-11-10 meeting? All in favor?
Status and Update of Progress: PO Release
1. Beta Browser is Up!
Notices posted on po-dev, po-announce, po-internal
New link to feedback box on beta site- will go to PO-internal
2. Update on the Annotations that have no term associated with them
-Laurel compiled a list of the terms that have been obsoleted and how many annotations that are associated with them.
There were only 11 and only 5 of them are problematic: floral bud, gametophyte, leaf whorl, seedling and sporophyte. File:Obseleted terms (LC 8-10-10).pdf
-We are working on determining where to reassign the terms and contacting the groups that submitted them
PO:0009003: sporophyte 117:
po_anatomy_gene_arabidopsis_tair.assoc
po_anatomy_gene_oryza_gramene.assoc
po_anatomy_qtl_oryza_gramene.assoc
PO:0000056: floral bud 54:
po_anatomy_gene_arabidopsis_tair.assoc
PO:0009004:gametophyte 1:
po_anatomy_gene_oryza_gramene.assoc
PO:0008034: leaf whorl 15802:
po_anatomy_gene_arabidopsis_tair.assoc
PO:0008037: seedling 16:
po_anatomy_gene_arabidopsis_tair.assoc
- We discussed possibly re-configuring the PO web page so that more information shows up for each annotation, so it is clearer to the users how annotations differ from one another- tabled for later after the release comes out.
We discussed whether or not it would be better for the user groups who made the annotations to decide where to move the terms we are uncertain about. In any case, we will need to prepare a list for them including the terms that were moved automatically (because there was only one replacement term), and our suggestions for terms that could be replaced by multiple terms. They will need to approve any movement of annotations.
2. Notices are being posted on the PO mail lists: po-announce, po-dev, the PO web page and the Jaiswal lab web page that the beta version is available for review.
Ramona and Lol will work on an announcement. Dennis will also send this to the BSA for posting in their Plant Sciences Bulletin. Needs to get to BSA by the end of the week.
3. The documentation page will be posted on the POwiki page and the PO webpage with details of the changes made in the new release.
-wiki page has been created. We will load documentation of changes as we go along.
Ramona and Lol will discuss what needs to go on this page, and get it posted.
