Difference between revisions of "PAG2011 Computer Demo"
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====Changes to the PO in the past year==== | ====Changes to the PO in the past year==== | ||
| − | + | Expansion to include all plants: | |
| − | - | + | -more general definitions of upper-level terms |
| − | -Progress toward Obo-Foundry compliance | + | -new taxon-specific terms |
| + | |||
| + | |||
| + | New upper-level structure for PSO | ||
| + | |||
| + | |||
| + | Progress toward Obo-Foundry compliance: | ||
| + | |||
| + | -complete "is_a" hierarchy | ||
| + | |||
| + | -standardized definitions in genus-differentia form | ||
| + | |||
| + | -compliance with Basic Formal Ontology structure | ||
===Overview of the POC website=== | ===Overview of the POC website=== | ||
Revision as of 15:01, 4 January 2011
Outline:
Introduction of the POC project
General introduction
Goals of POC:
-develop a structured vocabulary for plant anatomical entities and plant growth and developmental stages (the PO)
-develop an infrastructure to support plant comparative genomics (PO plus associations)
-community outreach to encourage contributions of annotations for more species (web-based annotation tool)
Changes to the PO in the past year
Expansion to include all plants:
-more general definitions of upper-level terms
-new taxon-specific terms
New upper-level structure for PSO
Progress toward Obo-Foundry compliance:
-complete "is_a" hierarchy
-standardized definitions in genus-differentia form
-compliance with Basic Formal Ontology structure
Overview of the POC website
-keep it brief
-Plans to update webpage?
Using the ontology browser
-searching
-browsing
-accessing annotations
-upcoming: links to images through PlantSystematics.org
Requesting new terms
-link to SVN through PO homepage
-register and sign in before submitting!
-how to view old tracker items
Downloading the PO files
-link to download page
-ontology files can be viewed in text editor or OboEdit
Contributing annotations
I need input here on how this is done
