Difference between revisions of "Plant Ontology Citations"

Revision as of 05:42, 16 October 2012

Lai L, Liberzon A, Hennessey J, Jiang G, Qi J, Mesirov JP, Ge SX (2012) AraPath: a knowledgebase for pathway analysis in Arabidopsis. Bioinformatics 28: 2291–2292. [1]

Deans, Andrew R., Matthew J. Yoder, and James P. Balhoff. “Time to Change How We Describe Biodiversity.” Trends in Ecology & Evolution 27, no. 2 (February 1, 2012): 78–84. link to full text

Kumar, T. K. A., Crow, J. A., Wennblom, T. J., Abril, M., Letcher, P. M., Blackwell, M., Roberson, R. W., and McLaughlin, D. J. (2011). An ontology of fungal subcellular traits. American Journal of Botany, 98, 1504 -1510. Kumar et al, 2011

Schaeffer, M. L., Harper, L. C., Gardiner, J. M., Andorf, C. M., Campbell, D. A., Cannon, E. K. S., Sen, T. Z., and Lawrence, C. J. (2011). MaizeGDB: curation and outreach go hand-in-hand. Database, 2011.

Hong, C. (2010). Competency evaluation of plant character ontologies against domain literature. Journal of the American Society for Information Science & Technology, 61(6), 1144-1165. doi:10.1002/asi.21325

Qiuling He, Arthur Berg, Yao Li, C. Eduardo Vallejos and Rongling Wu. 2010. Mapping genes for plant structure, development and evolution: functional mapping meets ontology. Trends in Genetics 26(1): 39-46 Abstract Full Text

De Bodt, S., Carvajal, D., Hollunder, J., Van den Cruyce, J., Movahedi, S., and Inze, D. (2010). CORNET: A User-Friendly Tool for Data Mining and Integration. Plant Physiol., 152, 1167-1179.

Clark, J. I., Brooksbank, C., and Lomax, J. (2005). It's All GO for Plant Scientists. Plant Physiol., 138, 1268-1279. (this does not actually cite the PO)

Kobayashi N, Ishii M, Takahashi S, Mochizuki Y, Matsushima A, Toyoda T (2011) Semantic-JSON: a lightweight web service interface for Semantic Web contents integrating multiple life science databases. Nucleic Acids Research 39: W533 –W540

McCouch, S. R., McNally, K. L., Wang, W. and Sackville Hamilton, R. (2012). Genomics of gene banks: A case study in rice. Am J of Bot., 99, 407 -423. Link to full text

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−	* Lai L, Liberzon A, Hennessey J, Jiang G, Qi J, Mesirov JP, Ge SX (2012) AraPath: a knowledgebase for pathway analysis in Arabidopsis. Bioinformatics 28: 2291–2292.	+	* Lai L, Liberzon A, Hennessey J, Jiang G, Qi J, Mesirov JP, Ge SX (2012) AraPath: a knowledgebase for pathway analysis in Arabidopsis. Bioinformatics 28: 2291–2292. [http://bioinformatics.oxfordjournals.org/content/28/17/2291.abstract]

	*Deans, Andrew R., Matthew J. Yoder, and James P. Balhoff. “Time to Change How We Describe Biodiversity.” Trends in Ecology & Evolution 27, no. 2 (February 1, 2012): 78–84. [http://www.cell.com/trends/ecology-evolution/fulltext/S0169-5347(11)00330-2 link to full text]		*Deans, Andrew R., Matthew J. Yoder, and James P. Balhoff. “Time to Change How We Describe Biodiversity.” Trends in Ecology & Evolution 27, no. 2 (February 1, 2012): 78–84. [http://www.cell.com/trends/ecology-evolution/fulltext/S0169-5347(11)00330-2 link to full text]