Difference between revisions of "POC Conf. Call 6-26-12"

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(Created page with 'POC meeting, Webex Conference Call; Date: Tuesday June 26th, 2012 10am PDT/1pm EDT In attendance: POC members: Absent: Collaborators: none Any changes or corrections (addi…')
 
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Back to [[POC Meetings Minutes]]
 
Back to [[POC Meetings Minutes]]
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=Upcoming meetings and Presentations 2012:=
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==[http://www.botanyconference.org/ Botany 2012]==
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July 7 - 11, 2012 - Columbus, Ohio
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[http://www.botanyconference.org/engine/search/index.php?func=detail&aid=31 PO workshop] on '''Sunday, July 8th, 9:00AM - 12:00PM'''
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see: link on [http://www.2012.botanyconference.org/info/Workshops.php Botany 2012 workshops schedule] to view the abstract.
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Wiki page for workshop: [[Plant Ontology Workshop, Botany 2012]]
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Goal of workshop:  To teach people (mostly botanists) how to access and use the PO, including how to send feedback, suggest new terms, etc.
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PJ: suggest that we go there with a 'draft' version of the Plant Phenotype Ontology and show them how to use these in character matrices. 
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''A desktop version of the image annotation software should be ready to demo at this meeting.''
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Announcement has been posted on the PO home page and FB page.
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===exhibitor's booth===
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We had considered hosting an [http://www.2011.botanyconference.org/info/ExhibitorInfo2.pdf outreach booth]. (Not a bad deal for non-profits: $500 for A 10 x 10 Booth Space at Botany 2012, and 2 complimentary registrations for the conference)
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''We decided that there were not enough people at the conference to man a booth and we could put up a display at the NYBG booth''
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''RW will look into purchasing a TV/monitor (~22") that could display a rotating slideshow. Could also be used for future presentations''
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==Bio-Ontologies SIG 2012==
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Where: July 13 - 14, 2012, Long Beach, CA. Co-located with [http://www.iscb.org/ismb2012 ISMB 2012]
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When: Submissions Due: April 13th, 2012 (Fri)
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See: [http://www.bio-ontologies.org.uk/call-for-participation Bio-Ontologies SIG 2012]
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Three types of submissions.
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- Short papers, up to 4 pages.
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- Poster abstracts, up to 1 page.
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- Flash updates, up to 1 page
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Successful papers will be presented at the Bio-Ontologies SIG.
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Poster abstracts: time will be allocated during the 2 days for at least one poster session.
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Flash updates are for short talks (5 min) giving the salient new developments on existing public ontologies. Authors of posters can also provide a flash update. Unsuccessful papers will automatically be considered for poster presentation.
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==ASPB Plant Biology 2012==
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July 20 - 24, 2012 - Plant Biology 2012, Austin, TX
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Link to meeting page: [http://austin2012.aspb.org/ ASPB2012]
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Abstract was submitted for submission: Poster Number: P28002
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[http://my.aspb.org/default.asp?page=Meetings_PB12Wrkshps Plant Informatics Workshop] is planned with TAIR, Gramene and PO : Saturday, July 21, 2012, 7:30 PM - 10:30 PM
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LC and PJ are attending
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==ICBO 2012==
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'''International Conference on Biomedical Ontologies''' ([http://purl.bioontology.org/ICBO/ ICBO 2012]), July 22nd-25th, Graz, Austria
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co-located with the 7th International Conference on [http://www.kr-med.org/icbofois2012/ Formal Ontologies in Information Systems] (FOIS 2012)
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RW and BS (with JE, AG, DWS and PJ) submitted a short paper describing a plant disease extension of the Infectious Disease Ontology. This paper was accepted. Wiki page for notes on [[Plant Disease Ontology]].
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'''Relevant dates'''
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* Feb. 28th, 2012: Notification of paper acceptance
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* April 15th, 2012: Poster, early career symposium, software demonstrations and workshop papers submission deadline
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* May 15th, 2012: Notification of poster, early career symposium, software demonstrations and workshop paper acceptance
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* June 30th 2012: Deadline for all camera-ready copies for the proceedings
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RW will present the IDO-Plant paper and a poster on the PO-FNA collaboration.
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BS will be organizing an OBO Foundry meeting the afternoon of the day before the conference starts
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==Anatomy Ontology Course at NESCent, July 30th- Aug 3rd, 2012==
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Link to:  [https://academy.nescent.org/wiki/Anatomy_ontologies Anatomy Ontology course]
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from Paula Mabee: Opening are available the Anatomy Ontology course.
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Link to [https://academy.nescent.org/wiki/Ontologies_2012_course_materials Course materials]
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This course aims to teach proper ontology design principles and practices such that anatomical interoperability across evolutionarily disparate taxa is achieved. It further seeks to promote community growth and adoption of ontology-based methods and tools. The subsequent benefit is in the form of shared access to the unique data store of each community (e.g. genetic, genomic, developmental, and evolutionary data).
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Apply here:  [https://docs.google.com/spreadsheet/viewform?formkey=dEVyQUJkYjJ4WXIzYUIwaWlNOWRCWGc6MA#gid=0]
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Application deadline is April 4th, 2012 (extended through mid-April)
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LM will be attending
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==Crop Ontology Workshop==
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For more information see the wiki page: [[Plant Ontology Crop Annotation Workshop at OSU, 2012]]
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Dates: Sept. 13-15th
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The focus of the workshop will be on mostly development stages and traits for the crop plants

Revision as of 13:23, 25 June 2012

POC meeting, Webex Conference Call; Date: Tuesday June 26th, 2012 10am PDT/1pm EDT

In attendance:

POC members:

Absent:


Collaborators: none


Any changes or corrections (additions/deletions, etc) needed in the minutes from the POC_Conf._Call_6-19-12?

Back to POC Meetings Minutes


Upcoming meetings and Presentations 2012:

Botany 2012

July 7 - 11, 2012 - Columbus, Ohio

PO workshop on Sunday, July 8th, 9:00AM - 12:00PM

see: link on Botany 2012 workshops schedule to view the abstract.

Wiki page for workshop: Plant Ontology Workshop, Botany 2012

Goal of workshop: To teach people (mostly botanists) how to access and use the PO, including how to send feedback, suggest new terms, etc.

PJ: suggest that we go there with a 'draft' version of the Plant Phenotype Ontology and show them how to use these in character matrices.

A desktop version of the image annotation software should be ready to demo at this meeting.

Announcement has been posted on the PO home page and FB page.

exhibitor's booth

We had considered hosting an outreach booth. (Not a bad deal for non-profits: $500 for A 10 x 10 Booth Space at Botany 2012, and 2 complimentary registrations for the conference)

We decided that there were not enough people at the conference to man a booth and we could put up a display at the NYBG booth

RW will look into purchasing a TV/monitor (~22") that could display a rotating slideshow. Could also be used for future presentations

Bio-Ontologies SIG 2012

Where: July 13 - 14, 2012, Long Beach, CA. Co-located with ISMB 2012

When: Submissions Due: April 13th, 2012 (Fri)

See: Bio-Ontologies SIG 2012

Three types of submissions.

- Short papers, up to 4 pages. - Poster abstracts, up to 1 page. - Flash updates, up to 1 page

Successful papers will be presented at the Bio-Ontologies SIG.

Poster abstracts: time will be allocated during the 2 days for at least one poster session.

Flash updates are for short talks (5 min) giving the salient new developments on existing public ontologies. Authors of posters can also provide a flash update. Unsuccessful papers will automatically be considered for poster presentation.

ASPB Plant Biology 2012

July 20 - 24, 2012 - Plant Biology 2012, Austin, TX

Link to meeting page: ASPB2012

Abstract was submitted for submission: Poster Number: P28002

Plant Informatics Workshop is planned with TAIR, Gramene and PO : Saturday, July 21, 2012, 7:30 PM - 10:30 PM

LC and PJ are attending

ICBO 2012

International Conference on Biomedical Ontologies (ICBO 2012), July 22nd-25th, Graz, Austria

co-located with the 7th International Conference on Formal Ontologies in Information Systems (FOIS 2012)

RW and BS (with JE, AG, DWS and PJ) submitted a short paper describing a plant disease extension of the Infectious Disease Ontology. This paper was accepted. Wiki page for notes on Plant Disease Ontology.

Relevant dates

  • Feb. 28th, 2012: Notification of paper acceptance
  • April 15th, 2012: Poster, early career symposium, software demonstrations and workshop papers submission deadline
  • May 15th, 2012: Notification of poster, early career symposium, software demonstrations and workshop paper acceptance
  • June 30th 2012: Deadline for all camera-ready copies for the proceedings

RW will present the IDO-Plant paper and a poster on the PO-FNA collaboration.

BS will be organizing an OBO Foundry meeting the afternoon of the day before the conference starts

Anatomy Ontology Course at NESCent, July 30th- Aug 3rd, 2012

Link to: Anatomy Ontology course

from Paula Mabee: Opening are available the Anatomy Ontology course.

Link to Course materials

This course aims to teach proper ontology design principles and practices such that anatomical interoperability across evolutionarily disparate taxa is achieved. It further seeks to promote community growth and adoption of ontology-based methods and tools. The subsequent benefit is in the form of shared access to the unique data store of each community (e.g. genetic, genomic, developmental, and evolutionary data).

Apply here: [1]

Application deadline is April 4th, 2012 (extended through mid-April)

LM will be attending

Crop Ontology Workshop

For more information see the wiki page: Plant Ontology Crop Annotation Workshop at OSU, 2012

Dates: Sept. 13-15th

The focus of the workshop will be on mostly development stages and traits for the crop plants

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