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| − | ==TraitNet requests==
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080906&group_id=76834&atid=835555 corm]
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| − | proposed def: A short, enlarged storage stem in which the internodes do not elongate. Comment: usually underground.
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| − | child of stem (PO:0009047).
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080911&group_id=76834&atid=835555 podarium]
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| − | Their comment: is synonym to Tubercle
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| − | podarium (from Beentje 2010): (in cacti or other succulents) a modified leaf base functioning as the photosynthesising organ.
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| − | tubercle (from Beentje 2010): (in ball- or barrel- shaped cacti), cone-shaped protuberances that are elnarge modified leaf bases fused with adjacent stem tissue (tubercle has two other definitions as well).
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| − | proposed def:
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080913&group_id=76834&atid=835555 pneumatophore]
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| − | definition from Beentje (2010): erect (breathing) root protruding above the soil, encountered especially in mangroves
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| − | proposed def: A root that is erect and protrudes above the soil, found in trees that live in flooded habitats such as mangroves. Comment: Pneumatophores may provide oxygen to below ground roots growing in flooded soils.
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080916&group_id=76834&atid=835555 diaspore]
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| − | definition from Beentje (2010): reproductive portion of a plant, such as a seed, fruit or fragment of fruit, that is dispersed and may give rise to a new plant.
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| − | We could add this term as a kind of upper level bin term (similar to trichome)
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080919&group_id=76834&atid=835555 cone]
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| − | Should probably be a synonym of strobilus (PO:0025083). Narrow or exact?
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080922&group_id=76834&atid=835555 sorus]
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| − | from Crum (2001): a cluster of fern sporangia
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| − | from Beentje (2010): (of pteridophytes) structure bearing or containing groups of sporangia.
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| − | Proposed definition: A cardinal organ part composed of a cluster of two or more adjacent sporagia on the surface of a leaf. Comment: May be enclosed by an indusium.
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| − | Part_of vascular leaf, has_part sporangium
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| − | [https://sourceforge.net/tracker/?func=detail&aid=3080925&group_id=76834&atid=835555 tendril]
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| − | Defintion from Beentje (2010): a slender, coiling structure derived from a branch, leaf or inflorescence and used for climbing.
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| − | tendrils can derived from multiple types of structures. Suggest we make separate terms:
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| − | branch tendril (child of branch): A branch that is slender and coiling. Comment: Aids plant in climbing.
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| − | leaf tendril (child of leaf): A leaf that is slender and coiling and lacks a lamina. Comment: Aids plant in climbing.
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| − | leaflet tendril (child of leaflet): A leaflet that is slender and coiling. Comment: Aids plant in climbing.
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| − | leaf apex tendril (child of leaf apex): A leaf apex that is slender and coiling. Comment: Aids plant in climbing.
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| − | Can add other types of tendrils if they come up or users need them.
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| − | ===[https://sourceforge.net/tracker/index.php?func=detail&aid=2899934&group_id=76834&atid=835555 root terms]===
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| − | submitted by Rich Zobel (Nov 2009)
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| | ==User requests still open on Source Forge; PGDSO == | | ==User requests still open on Source Forge; PGDSO == |
Revision as of 22:19, 22 February 2011
POC meeting, Webex Conference Call; Date: Tuesday Mar 8th, 2011 10am (PST)
In attendance:
POC members:
Absent:
Collaborators:
Acceptance of the minutes from the POC_Conf._Call_3-1-11?
User requests still open on Source Forge; PGDSO
This item has been open on SF since 6/2009
I have a bunch of potato genes which are expressed in different tuber developmental stages (e.g. the potato pmt gene is expressed in small sprouts only (http://www.ncbi.nlm.nih.gov/pubmed/16088399).
Suggested stages:
-sprout development (does this correspond to tube axillary bud development? Should come after tuber maturation)
-tuber initiation
-tuber growth
-tuber maturation
How we work these in will depend on restructuring of PGDSO
l development in legumes (Plant Physiol, March 2003, Vol. 131, pp. 911-926
This is a fairly new request for terms for cotton
Upcoming meetings 2011:
* ICBO 2011 Second International Conference on Biomedical Ontology
July 26-30, 2011
Buffalo, New York
ICBO
LC contributed to the workshop proposal "From Fins to Limbs to Leaves: Facilitating anatomy ontology interoperability"
Authors: Melissa Haendel, Chris Mungall, Alan Ruttenberg, David Osumi-Sutherland and Laurel Cooper
Submitted: February 15th, 2011
- LC will attend and represent the PO. Invite other plant people? Will talk with Elizabeth Arnaud at the upcoming meeting.
-BS suggested we might want to submit a short paper which could be published in longer form later- see above
*Plant Biology 2011, Aug 6-10th, Minneapolis, Minn
Plant Biology 2011
Early-bird registration ends May 13.
Abstract deadlines: Your abstract must be submitted by March 11 if you want it to be considered for a minisymposium talk.
For inclusion on the program memory stick and in the program book, abstracts must be submitted by May 27.
* International Botanical Congress (IBC2011)
July 23rd-30th 2011, Melbourne, Australia
Registration is open Important dates
Symposium proposal was accepted, 'Bio-Ontologies for the Plant Sciences' under the Genetics, Genomics and Bioinformatics theme.
Dennis, Alejandra, Pankaj and Ramona are planning to attend.
See IBC 2011 Bio-Ontologies Symposium wiki page for more details
Next meeting scheduled for Tues, Mar. 15th, 2011 at 10am PST
