Difference between revisions of "PAG 2011 Collaborators Workshop"
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Summary: Stefan's group is developing a moss ontology. He will tell us about how they are developing the PO to MO mappings and annotating the Physcomitrella genome and transcriptome. | Summary: Stefan's group is developing a moss ontology. He will tell us about how they are developing the PO to MO mappings and annotating the Physcomitrella genome and transcriptome. | ||
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Revision as of 20:21, 14 December 2010
Date and Time:
Sunday, January 16th, Late Morning to include a buffet lunch
Time: 10:30-1:00 pm (will wrap up in time to get to 1:30 sessions)
Where: Town and Country Hotel, Windsor Room
Link to Registration Site and Survey:
Please visit the site and register so we know how many are coming for lunch.
Summary and Objectives:
- We will have about 4 or 5 speakers from groups who are current or potential collaborators
- The goal is to show a range of uses and highlight the utility of the Plant Ontology to the plant science community.
- Each speaker will have about 10-15 minutes, including time for questions, (~ 5-10 slides)
- We will have a 'working lunch' where folks can mingle and continue discussions
Agenda:
10:30am: Welcome and Opening
Laurel Cooper, Coordinator, Plant Ontology Consortium
10:40am: Ramona Walls, Plant Ontology Consortium
Title: "Introduction to the Plant Ontology- Where does my project fit in?"
10:55am: Mary Schaeffer, MaizeGDB
Title: TBA
Summary: The Plant Ontology is being utilized as MaizeGBD develops a Maize Gene Atlas. They are working on a large set of Nimblegen and RNA_Seq expression data, from 61 tissues, at various plant growth stages. These data will be added to the Plant Ontology's existing annotations.
11:10am: Claude dePamphilis and/or Jim Leebens-Mack
Title: TBA
Summary: An overview of the Floral Genome and Ancestral Angiosperm Genome Projects where they have been collecting 'immense Next Gen transcriptome datasets of several basal angiosperms'. A look at the specific issues that basal angiosperms raise for PO.
11:25am: Stefan Rensing
Title: TBA
Summary: Stefan's group is developing a moss ontology. He will tell us about how they are developing the PO to MO mappings and annotating the Physcomitrella genome and transcriptome.
11:40am: TBA
11:55am: Closing Comments and Summary
Laurel Cooper, Coordinator, Plant Ontology Consortium
12 to 1pm: Lunch and Networking Time
Build-Your-Own Sandwich Buffet Lunch
- Soup du Jour
- Sandwich Buffet:
Selection of Sliced Meats and Cheeses
Assorted Freshly Baked Deli Breads
Condiments to include leaf lettuce, sliced tomatoes, onions, mayonnaise and mustards
Crisp potato chips
- Salad Selections:
Red Potato Salad
Pasta Salad Primavera
Marinated Tomatoes and Cucumbers
Variety of Seasonal Greens with Choice of Dressings
- Deserts:
Assorted whole fresh fruits
Chef's Sweets Table
- Freshly brewed coffee, decaffeinated coffee and tea
