Difference between revisions of "Oryza sativa, IMP, Gramene Genes"

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|0101319||APL1||ADP-glucose Pyrophosphorylase large subunit 1|| PO:0009066||leaf sheath||Anatomy||16275672||||
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|0101319||APL1||ADP-glucose Pyrophosphorylase large subunit 1|| PO:0009066||leaf sheath||anatomy||16275672||||
 
|-
 
|-
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|0800010||AID1||Anther Indehiscence1||PO:0000003||  whole plant  ||Anatomy||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0000003||  whole plant  ||anatomy||15247409||||
 
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|-
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|0800010||AID1||Anther Indehiscence1||PO:0005001||basal axillary shoot system||Anatomy||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0005001||basal axillary shoot system||anatomy||15247409||||
 
|-
 
|-
−
|0800010||AID1||Anther Indehiscence1||PO:0009051||spikelet||Anatomy||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0009051||spikelet||anatomy||15247409||||
 
|-
 
|-
−
|0800010||AID1||Anther Indehiscence1||PO:0007073||2 formation of axillary shoot stage||Development||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0007073||2 formation of axillary shoot stage||development||15247409||||
 
|-
 
|-
−
|0800010||AID1||Anther Indehiscence1||PO:0007016||whole plant flowering stage||Development||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0007016||whole plant flowering stage||development||15247409||||
 
|-
 
|-
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|60058||APO1||Aberrant Panicle Organization||PO:0000003||whole plant||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0000003||whole plant||anatomy||15950602||||
 
|-
 
|-
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|60058||APO1||Aberrant Panicle Organization||PO:0000230||inflorescence meristem||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0000230||inflorescence meristem||anatomy||15950602||||
 
|-
 
|-
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|60058||APO1||Aberrant Panicle Organization||PO:0006321||primary inflorescence branch||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0006321||primary inflorescence branch||anatomy||15950602||||
 
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|-
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|60058||APO1||Aberrant Panicle Organization||PO:0006322||second order inflorescence branch||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0006322||second order inflorescence branch||anatomy||15950602||||
 
|-
 
|-
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|60058||APO1||Aberrant Panicle Organization||PO:0009025||vascular leaf||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0009025||vascular leaf||anatomy||15950602||||
 
|-
 
|-
−
|60058||APO1||Aberrant Panicle Organization||PO:0009051||spikelet||Anatomy||15950602||||
+
|60058||APO1||Aberrant Panicle Organization||PO:0009051||spikelet||anatomy||15950602||||
 
|-
 
|-
−
|60058||APO1||Aberrant Panicle Organization||PO:0009081||inflorescence branch||Anatomy||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0009081||inflorescence branch||anatomy||15950602||||
 
|-
 
|-
−
|60058||APO1||Aberrant Panicle Organization||PO:0001050 ||leaf development stage||Development||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0001050 ||leaf development stage||development||15950602||||
 
|-
 
|-
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|60058||APO1||Aberrant Panicle Organization||PO:0001083 ||inflorescence development stage||Development||15950602||||
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|60058||APO1||Aberrant Panicle Organization||PO:0001083 ||inflorescence development stage||development||15950602||||
 
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|-
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|60068||BC1||BRITTLE CULM 1||PO:0001051 ||1 leaf initiation stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0001051 ||1 leaf initiation stage||development||12953108||||
 
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|-
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|60068||BC1||BRITTLE CULM 1||PO:0001053||3 leaf fully expanded stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0001053||3 leaf fully expanded stage||development||12953108||||
 
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|-
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|60068||BC1||BRITTLE CULM 1||PO:0007006|| IL.00 inflorescence just visible stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0007006|| IL.00 inflorescence just visible stage||development||12953108||||
 
|-
 
|-
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|60068||BC1||BRITTLE CULM 1||PO:0007023||IE.04 inflorescence fully emerged from flag leaf sheath stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0007023||IE.04 inflorescence fully emerged from flag leaf sheath stage||development||12953108||||
 
|-
 
|-
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|60068||BC1||BRITTLE CULM 1||PO:0007089|| stem elongation stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0007089|| stem elongation stage||development||12953108||||
 
|-
 
|-
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|60068||BC1||BRITTLE CULM 1||PO:0007109|| SE.99 maximum stem length reached stage||Development||12953108||||
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|60068||BC1||BRITTLE CULM 1||PO:0007109|| SE.99 maximum stem length reached stage||development||12953108||||
 
|-
 
|-
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|60070||BC3||BRITTLE CULM 3||PO:0009047||stem||Anatomy||GR_gene:5651||||
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|60070||BC3||BRITTLE CULM 3||PO:0009047||stem||anatomy||GR_gene:5651||||
 
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|-
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|60070||BC3||BRITTLE CULM 3||PO:0007041|| inflorescence emergence stage||Development||GR_gene:5651||||
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|60070||BC3||BRITTLE CULM 3||PO:0007041|| inflorescence emergence stage||development||GR_gene:5651||||
 
|-
 
|-
−
|60073||BC6||BRITTLE CULM 6||PO:0000003|| whole plant||Anatomy||GR_gene:5933
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|60073||BC6||BRITTLE CULM 6||PO:0000003|| whole plant||anatomy||GR_gene:5933
 
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|-
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|60073||BC6||BRITTLE CULM 6||PO:0007131||seedling development stage|||Development||GR_gene:5933
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|60073||BC6||BRITTLE CULM 6||PO:0007131||seedling development stage|||development||GR_gene:5933
 
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|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0000003||whole plant||Anatomy||16808934||||
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0000003||whole plant||anatomy||16808934||||
 
|-
 
|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0006341||primary shoot system||Anatomy||16808934||||
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0006341||primary shoot system||anatomy||16808934||||
 
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|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0025025||root system||Anatomy||16808934||||
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0025025||root system||anatomy||16808934||||
 
|-
 
|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0000003||whole plant||Anatomy||16808934||||
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0000003||whole plant||anatomy||16808934||||
 
|-
 
|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0025073||branch||Anatomy||16808934||||
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0025073||branch||anatomy||16808934||||
 
|-
 
|-
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|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0007520||root development stage||Development||16808934||||
+
|80018||BLE3||BRASSINOLIDE ENHANCED GENE 3||PO:0007520||root development stage||development||16808934||||
 
|-
 
|-
−
|101269||COIN||Cold inducible|| PO:0000003||whole plant||Anatomy||17549515||||
+
|101269||COIN||Cold inducible|| PO:0000003||whole plant||anatomy||17549515||||
 
|-
 
|-
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|101269||COIN||Cold inducible||PO:0009002||plant cell||Anatomy||17549515||||
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|101269||COIN||Cold inducible||PO:0009002||plant cell||anatomy||17549515||||
 
|-
 
|-
−
|20064||CPS1||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||Anatomy||16861806||||
+
|20064||CPS1||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||anatomy||16861806||||
 
|-
 
|-
−
|20065||CPS2||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||Anatomy||16861806||||
+
|20065||CPS2||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||anatomy||16861806||||
 
|-
 
|-
−
|20066||CPS4||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||Anatomy||16861806||||
+
|20066||CPS4||ent-copalyl diphosphate synthase 1 ||PO:0009006||shoot system||anatomy||16861806||||
 
|-
 
|-
−
|80030||CPT1||Coleoptile Phototropism|| PO:0020033 ||coleoptile||Anatomy|| 15598797||||
+
|80030||CPT1||Coleoptile Phototropism|| PO:0020033 ||coleoptile||anatomy|| 15598797||||
 
|-
 
|-
−
|80030||CPT1||Coleoptile Phototropism|| PO:0025025||root system||Anatomy|| 15598797||||
+
|80030||CPT1||Coleoptile Phototropism|| PO:0025025||root system||anatomy|| 15598797||||

Revision as of 23:44, 15 August 2013

This data set was annotated as part of the Plant Phenotype Pilot Project

PO anatomy and growth stage annotations table:

GR_gene:ID Gene Symbol Gene Name PO:ID PO:Name PO:Aspect PMID: comments
0101319 APL1 ADP-glucose Pyrophosphorylase large subunit 1 PO:0009066 leaf sheath anatomy 16275672
0800010 AID1 Anther Indehiscence1 PO:0000003 whole plant anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0005001 basal axillary shoot system anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0009051 spikelet anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0007073 2 formation of axillary shoot stage development 15247409
0800010 AID1 Anther Indehiscence1 PO:0007016 whole plant flowering stage development 15247409
60058 APO1 Aberrant Panicle Organization PO:0000003 whole plant anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0000230 inflorescence meristem anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0006321 primary inflorescence branch anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0006322 second order inflorescence branch anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0009025 vascular leaf anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0009051 spikelet anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0009081 inflorescence branch anatomy 15950602
60058 APO1 Aberrant Panicle Organization PO:0001050 leaf development stage development 15950602
60058 APO1 Aberrant Panicle Organization PO:0001083 inflorescence development stage development 15950602
60068 BC1 BRITTLE CULM 1 PO:0001051 1 leaf initiation stage development 12953108
60068 BC1 BRITTLE CULM 1 PO:0001053 3 leaf fully expanded stage development 12953108
60068 BC1 BRITTLE CULM 1 PO:0007006 IL.00 inflorescence just visible stage development 12953108
60068 BC1 BRITTLE CULM 1 PO:0007023 IE.04 inflorescence fully emerged from flag leaf sheath stage development 12953108
60068 BC1 BRITTLE CULM 1 PO:0007089 stem elongation stage development 12953108
60068 BC1 BRITTLE CULM 1 PO:0007109 SE.99 maximum stem length reached stage development 12953108
60070 BC3 BRITTLE CULM 3 PO:0009047 stem anatomy GR_gene:5651
60070 BC3 BRITTLE CULM 3 PO:0007041 inflorescence emergence stage development GR_gene:5651
60073 BC6 BRITTLE CULM 6 PO:0000003 whole plant anatomy GR_gene:5933
60073 BC6 BRITTLE CULM 6 PO:0007131 seedling development stage development GR_gene:5933
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0000003 whole plant anatomy 16808934
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0006341 primary shoot system anatomy 16808934
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0025025 root system anatomy 16808934
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0000003 whole plant anatomy 16808934
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0025073 branch anatomy 16808934
80018 BLE3 BRASSINOLIDE ENHANCED GENE 3 PO:0007520 root development stage development 16808934
101269 COIN Cold inducible PO:0000003 whole plant anatomy 17549515
101269 COIN Cold inducible PO:0009002 plant cell anatomy 17549515
20064 CPS1 ent-copalyl diphosphate synthase 1 PO:0009006 shoot system anatomy 16861806
20065 CPS2 ent-copalyl diphosphate synthase 1 PO:0009006 shoot system anatomy 16861806
20066 CPS4 ent-copalyl diphosphate synthase 1 PO:0009006 shoot system anatomy 16861806
80030 CPT1 Coleoptile Phototropism PO:0020033 coleoptile anatomy 15598797
80030 CPT1 Coleoptile Phototropism PO:0025025 root system anatomy 15598797
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