Difference between revisions of "Oryza sativa, IMP, Gramene Genes"

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Revision as of 19:57, 13 August 2013

This dataset was annotated as part of the Plant Phenotype Pilot Project

Legends:

  1. Gene ID: Gramene gene locus ID
  2. Cultivar: Nipponbare
  3. Gene data: Derived from supplementary tables ST2-ST25
  4. PO:annotations: best match to the sample description in the following tables. If required the PO annotations to growth stages were done to #both the organ/structure specific development stages and the whole plant growth stages. Every sample has PO whole plant growth stage #annotations.

PO anatomy and growth stage annotations table:

GR_gene:ID Gene Symbol Gene Name PO:ID PO:Name PO:Aspect PMID: comments
0101319 APL1 ADP-glucose Pyrophosphorylase large subunit 1 PO:0009066 leaf sheath Anatomy 16275672
0800010 AID1 Anther Indehiscence1 PO:0000003 whole plant Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0005001 basal axillary shoot system Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0009051 spikelet Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0007073 2 formation of axillary shoot stage Development 15247409
0800010 AID1 Anther Indehiscence1 PO:0007016 whole plant flowering stage Development 15247409
60058 APO1 Aberrant Panicle Organization PO:0000003 whole plant Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0000230 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0006321 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0006322 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0009025 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0009051 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0009081 xxxx Anatomy 20130422
60058 APO1 Aberrant Panicle Organization PO:0001050 xxxx Development 20130422
60058 APO1 Aberrant Panicle Organization PO:0001083 xxxx Development 20130422
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