Difference between revisions of "POC Conf. Call 6-14-11"

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'''This week's meeting was canceled.'''
==Report from the[http://www.iplantcollaborative.org/2011/02/09/2011-semantic-web-workshop-june-6-7-santa-fe-nm 2011 Semantic Web Workshop] June 6th and 7th, Santa Fe, NM==
 
 
 
 
 
Hosted by Damian Gessler and the iPlant Collaborative, this two-day workshop will focus on biological applications for semantic web services.
 
 
 
-JE and JP will be attending
 
 
 
-JE has already worked with Damian to implement a SSWAP web service for PO terms, so further collaboration with him and iPlant will benefit the POC going forward.
 
 
 
For more Workshop details: [http://www.iplantcollaborative.org/Communities/Developers/SemanticWeb Semantic web].
 
 
 
 
 
 
 
 
 
=User requests still open on Source Forge; PGDSO =
 
==[https://sourceforge.net/tracker/index.php?func=detail&aid=3035688&group_id=76834&atid=835555 terms for seed trichome development stages]==
 
 
 
This is a fairly new request for terms for cotton fiber development
 
 
 
 
 
 
 
==[http://sourceforge.net/tracker/index.php?func=detail&aid=2812238&group_id=76834&atid=835555 tuber growth and development stages]==
 
 
 
This item has been open on SF since 6/2009
 
 
 
I have a bunch of potato genes which are expressed in different tuber developmental stages (e.g. the potato pmt gene is expressed in small sprouts only (http://www.ncbi.nlm.nih.gov/pubmed/16088399).
 
 
 
Suggested stages:
 
 
 
-sprout development (does this correspond to tube axillary bud development? Should come after tuber maturation)
 
 
 
-tuber initiation
 
 
 
-tuber growth
 
 
 
-tuber maturation
 
 
 
How we work these in will depend on restructuring of PGDSO
 
 
 
l development in legumes (Plant Physiol, March 2003, Vol. 131, pp. 911-926
 
 
 
 
 
=Upcoming meetings 2011:=
 
 
 
'''Botany 2011 Meeting [[http://www.botanyconference.org/ Botany 2011]]'''  St. Louis, MO at the Chase Park Plaza, July 9-13.
 
 
 
Societies participating:
 
Society for Economic Botany, the American Fern Society (AFS), the American Society of Plant Taxonomists (ASPT), and the Botanical Society of America (BSA).
 
 
 
Anybody going??
 
 
 
 
 
'''* ICBO 2011  Second International Conference on Biomedical Ontology'''
 
July 26-30,  2011
 
Buffalo, New York
 
 
 
[http://icbo.buffalo.edu ICBO]
 
 
 
LC is co-organizing the workshop "From Fins to Limbs to Leaves: Facilitating anatomy ontology interoperability"
 
along with Melissa Haendel, Chris Mungall, Alan Ruttenberg, David Osumi-Sutherland.
 
 
 
'''Full-Day Workshops Schedule:'''
 
 
 
'''July 26 9am-6pm'''  The Ontological Representation of Adverse Events: Working with Multiple Biomedical Ontologies
 
 
 
'''July 27 8.30am-4pm''' Facilitating Anatomy Ontology Interoperability
 
 
 
'''July 26 6.30pm-9pm'''  Evening Workshop: Common Logic
 
 
 
'''July 27 4pm-8pm''' Evening Workshop: Doctoral and Post-Doctoral Consortium
 
 
 
- LC will attend and represent the PO. Invite other plant people?
 
 
 
 
 
 
 
'''*Plant Biology 2011, Aug 6-10th, Minneapolis, Minn'''
 
 
 
[http://my.aspb.org/?page=Meetings_Annual Plant Biology 2011]
 
 
 
 
 
For inclusion on the program memory stick and in the program book, abstracts must be submitted by '''May 27'''.
 
 
 
Gramene will be putting together a workshop again, focusing on pathways.  LC and PJ will present a PO poster.
 
 
 
TAIR (Kate Dreher) is organizing an Outreach Booth and we are invited to take part.
 
 
 
 
 
 
 
 
 
'''* International Botanical Congress (IBC2011)'''
 
 
 
July 23rd-30th 2011, Melbourne, Australia'''
 
 
 
Registration is open  [http://www.ibc2011.com/Dates.htm Important dates]
 
 
 
Symposium 'Bio-Ontologies for the Plant Sciences' under the Genetics, Genomics and Bioinformatics theme, wiil be held on Thursday, 27 July, from 13:30 to 15:30.
 
 
 
Dennis, Alejandra, Pankaj and Ramona are planning to attend.
 
 
 
See [[IBC 2011 Bio-Ontologies Symposium]] wiki page for more details
 

Latest revision as of 18:30, 24 June 2011

POC meeting, Webex Conference Call; Date: Tuesday June 14th, 2011 10am (PDT)

In attendance:

POC members:

Absent:

Collaborators:


Acceptance of the minutes from the POC_Conf._Call_6-7-11?


This week's meeting was canceled.