Difference between revisions of "Oryza sativa LCM Aya et al, 2011"
From Plant Ontology Wiki
Jump to navigationJump to searchm (moved Rice LCM Aya et al, 2011 to Oryza sativa LCM Aya et al, 2011) |
|||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | [ | + | Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays. |
| + | |||
| + | [http://www.ncbi.nlm.nih.gov/pubmed/22046259 Aya et al. 2011] | ||
---- | ---- | ||
Latest revision as of 17:32, 18 August 2014
Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays.
Legends:
- Gene ID: RAP-japan/IRGSP rice gene locus ID
- Cultivar: Nipponbare
- Gene data: Derived from supplementary tables ST2-ST25
- PO:annotations: best match to the sample description in the following tables. If required the PO annotations to growth stages were done to #both the organ/structure specific development stages and the whole plant growth stages. Every sample has PO whole plant growth stage #annotations.
PO anatomy and growth stage annotations table:
| Sample ID | Dataset | Anatomy PO ID | growth stage PO ID | growth stage PO ID | ' | comments |
| Anther at premeiosis stage, replicate 1_LMD sample | Pre_anther | PO:0009066 | PO:0001004 | PO:0007130 | ||
| Anther_0.3-0.6 mm | Anther_0.3-0.6 mm | PO:0009066 | PO:0001004 | PO:0007130 | ||
| Anther_0.7-1.0 mm | Anther_0.7-1.0 mm | PO:0009066 | PO:0001004 | PO:0007130 | ||
| Anther_1.2-1.5 mm | Anther_1.2-1.5 mm | PO:0009066 | PO:0001004 | PO:0007130 | ||
| Anther_1.6-2.0 mm | Anther_1.6-2.0 mm | PO:0009066 | PO:0001004 | PO:0007130 | ||
| Embryo_07 DAF | Embryo_07 DAF | PO:0009009 | PO:0001095 | PO:0007042 | At 5 DAP embryo differentiating the first leaf primordium | |
| Embryo_10 DAF | Embryo_10 DAF | PO:0009009 | PO:0001081 | PO:0007042 | Morphologically completed 10 DAP embryo | |
| Embryo_14 DAF | Embryo_14 DAF | PO:0009009 | PO:0001081 | PO:0007042 | milk stage | |
| Embryo_28 DAF | Embryo_28 DAF | PO:0009009 | PO:0001081 | PO:0007010 | dough | |
| Embryo_42 DAF | Embryo_42 DAF | PO:0009009 | PO:0001081 | PO:0007050 | ||
| Endosperm_07 DAF | Endosperm_07 DAF | PO:0009089 | PO:0007633 | PO:0007042 | ||
| Endosperm_10 DAF | Endosperm_10 DAF | PO:0009089 | PO:0007633 | PO:0007042 | ||
| Endosperm_14 DAF | Endosperm_14 DAF | PO:0009089 | PO:0007633 | PO:0007042 | ||
| Endosperm_28 DAF | Endosperm_28 DAF | PO:0009089 | PO:0007633 | PO:0007010 | ||
| Endosperm_42 DAF | Endosperm_42 DAF | PO:0009089 | PO:0007633 | PO:0007050 | ||
| Inflorescence_0.6-1.0 mm | Inflorescence_0.6-1.0 mm | PO:0009049 | PO:0001083 | PO:0007006 | ||
| Inflorescence_3.0-4.0 mm | Inflorescence_3.0-4.0 mm | PO:0009049 | PO:0001083 | PO:0007006 | ||
| Inflorescence_5.0-10.0 mm | Inflorescence_5.0-10 mm | PO:0009049 | PO:0001083 | PO:0007006 | ||
| Leaf blade_reproductive_00:00 | LeafBlade_76DAT_24:00 | PO:0020039 | - | PO:0007130 | ||
| Leaf blade_reproductive_12:00 | LeafBlade_76DAT_12:00 | PO:0020039 | - | PO:0007130 | ||
| Leaf blade_ripening_00:00 | LeafBlade_125DAT_24:00 | PO:0020039 | - | PO:0007010 | ||
| Leaf blade_ripening_12:00 | LeafBlade_125DAT_12:00 | PO:0020039 | - | PO:0007010 | ||
| Leaf blade_vegetative_00:00 | LeafBlade_27DAT_24:00 | PO:0020039 | - | PO:0007134 | ||
| Leaf blade_vegetative_12:00 | LeafBlade_27DAT_12:00 | PO:0020039 | - | PO:0007134 | ||
| Leaf sheath_reproductive_00:00 | LeafSheath_76DAT_24:00 | PO:0020104 | - | PO:0007130 | ||
| Leaf sheath_reproductive_12:00 | LeafSheath_76DAT_12:00 | PO:0020104 | - | PO:0007130 | ||
| Leaf sheath_vegetative_00:00 | LeafSheath_27DAT_24:00 | PO:0020104 | - | PO:0007134 | ||
| Leaf sheath_vegetative_12:00 | LeafSheath_27DAT_12:00 | PO:0020104 | - | PO:0007134 | ||
| Lemma_1.5-2.0 mm floret | Lemma_1.5-2.0 mm floret | PO:0009037 | PO:0001047 | PO:0007130 | ||
| Lemma_4.0-5.0 mm floret | Lemma_4.0-5.0 mm floret | PO:0009037 | PO:0001047 | PO:0007130 | ||
| Lemma_7.0 mm floret | Lemma_7.0 mm floret | PO:0009037 | PO:0001047 | PO:0007130 | ||
| Microspore at meiosis stage, replicate 1_LMD sample | MEI-microspore | PO:0020048 | PO:0001009 | PO:0007130 | ||
| Microspore at tetrad stage, replicate 1_LMD sample | TET-microspore | PO:0000032 | PO:0001029 | PO:0007130 | ||
| Microspore at uninuclear stage, replicate 1_LMD sample | UN-microspore | PO:0020048 | PO:0001013 | PO:0007130 | ||
| Ovary_01 DAF | Ovary_01 DAF | PO:0009072 | - | PO:0007042 | ||
| Ovary_03 DAF | Ovary_03 DAF | PO:0009072 | - | PO:0007042 | ||
| Ovary_05 DAF | Ovary_05 DAF | PO:0009072 | - | PO:0007042 | ||
| Ovary_07 DAF | Ovary_07 DAF | PO:0009072 | - | PO:0007042 | ||
| Palea_1.5-2.0 mm floret | Palea_1.5-2.0 mm floret | PO:0009038 | PO:0001048 | PO:0007130 | ||
| Palea_4.0-5.0 mm floret | Palea_4.0-5.0 mm floret | PO:0009038 | PO:0001048 | PO:0007130 | ||
| Palea_7.0 mm floret | Palea_7.0 mm floret | PO:0009038 | PO:0001048 | PO:0007130 | ||
| Pistil_10-14 cm panicle | Pistil_10-14 cm inflorescence | PO:0009030 | PO:0007606 | PO:0007130 | ||
| Pistil_14-18 cm panicle | Pistil_14-18 cm inflorescence | PO:0009030 | PO:0007606 | PO:0007130 | ||
| Pistil_5-10 cm panicle | Pistil_05-10 cm inflorescence | PO:0009030 | PO:0007606 | PO:0007130 | ||
| Pollen at bicelluar stage, replicate 1_LMD sample | BC-pollen | PO:0025281 | PO:0001059 | PO:0007130 | ||
| Pollen at tricelluar stage, replicate 1_LMD sample | TC-pollen | PO:0025281 | PO:0001015 | PO:0007130 | ||
| Root_reproductive_00:00 | Root_76DAT_24:00 | PO:0009005 | - | PO:0007130 | ||
| Root_reproductive_12:00 | Root_76DAT_12:00 | PO:0009005 | - | PO:0007130 | ||
| Root_vegetative_00:00 | Root_27DAT_24:00 | PO:0009005 | - | PO:0007134 | ||
| Root_vegetative_12:00 | Root_27DAT_12:00 | PO:0009005 | - | PO:0007134 | ||
| Stem_reproductive_00:00 | Stem_83DAT_24:00 | PO:0009047 | - | PO:0007130 | ||
| Stem_reproductive_12:00 | Stem_83DAT_12:00 | PO:0009047 | - | PO:0007130 | ||
| Stem_ripening_00:00 | Stem_90DAT_24:00 | PO:0009047 | PO:0007010 | PO:0007010 | ||
| Stem_ripening_12:00 | Stem_90DAT_12:00 | PO:0009047 | PO:0007010 | PO:0007010 | ||
| Tapetum at meiosis stage, replicate 1_LMD sample | MEI-tapetum | PO:0009071 | PO:0001009 | PO:0007130 | ||
| Tapetum at tetrad stage, replicate 1_LMD sample | TET-tapetum | PO:0009071 | PO:0001029 | PO:0007130 | ||
| Tapetum at uninuclear stage, replicate 1_LMD sample | UN-tapetum | PO:0009071 | PO:0001013 | PO:0007130 | ||
=====
Table S1 from [Aya et al.http://www.ncbi.nlm.nih.gov/pubmed/22046259] with GEO IDs of the 176 microarray profiles used the study.
| GEO_ID | DATA SET ID | SAMPLE ID | CULTIVATOR |
| GSM534579 | LeafBlade_27DAT_12:00_rep1 | Leaf blade_vegetative_12:00* | Nipponbare |
| GSM534580 | LeafBlade_27DAT_12:00_rep2 | Nipponbare | |
| GSM534581 | LeafBlade_27DAT_12:00_rep3 | Nipponbare | |
| GSM534582 | LeafBlade_27DAT_24:00_rep1 | Leaf blade_vegetative_00:00 | Nipponbare |
| GSM534583 | LeafBlade_27DAT_24:00_rep2 | Nipponbare | |
| GSM534584 | LeafBlade_27DAT_24:00_rep3 | Nipponbare | |
| GSM534585 | LeafBlade_76DAT_12:00_rep1 | Leaf blade_reproductive_12:00 | Nipponbare |
| GSM534586 | LeafBlade_76DAT_12:00_rep2 | Nipponbare | |
| GSM534587 | LeafBlade_76DAT_12:00_rep3 | Nipponbare | |
| GSM534588 | LeafBlade_76DAT_24:00_rep1 | Leaf blade_reproductive_00:00 | Nipponbare |
| GSM534589 | LeafBlade_76DAT_24:00_rep2 | Nipponbare | |
| GSM534590 | LeafBlade_76DAT_24:00_rep3 | Nipponbare | |
| GSM534591 | LeafBlade_125DAT_12:00_rep1 | Leaf blade_ripening_12:00 | Nipponbare |
| GSM534592 | LeafBlade_125DAT_12:00_rep2 | Nipponbare | |
| GSM534593 | LeafBlade_125DAT_12:00_rep3 | Nipponbare | |
| GSM534594 | LeafBlade_125DAT_24:00_rep1 | Leaf blade_ripening_00:00 | Nipponbare |
| GSM534595 | LeafBlade_125DAT_24:00_rep2 | Nipponbare | |
| GSM534596 | LeafBlade_125DAT_24:00_rep3 | Nipponbare | |
| GSM534597 | LeafSheath_27DAT_12:00_rep1 | Leaf sheath_vegetative_12:00* | Nipponbare |
| GSM534598 | LeafSheath_27DAT_12:00_rep2 | Nipponbare | |
| GSM534599 | LeafSheath_27DAT_12:00_rep3 | Nipponbare | |
| GSM534600 | LeafSheath_27DAT_24:00_rep1 | Leaf sheath_vegetative_00:00 | Nipponbare |
| GSM534601 | LeafSheath_27DAT_24:00_rep2 | Nipponbare | |
| GSM534602 | LeafSheath_27DAT_24:00_rep3 | Nipponbare | |
| GSM534603 | LeafSheath_76DAT_12:00_rep1 | Leaf sheath_reproductive_12:00 | Nipponbare |
| GSM534604 | LeafSheath_76DAT_12:00_rep2 | Nipponbare | |
| GSM534605 | LeafSheath_76DAT_12:00_rep3 | Nipponbare | |
| GSM534606 | LeafSheath_76DAT_24:00_rep1 | Leaf sheath_reproductive_00:00 | Nipponbare |
| GSM534607 | LeafSheath_76DAT_24:00_rep2 | Nipponbare | |
| GSM534608 | LeafSheath_76DAT_24:00_rep3 | Nipponbare | |
| GSM534609 | Root_27DAT_12:00_rep1 | Root_vegetative_12:00* | Nipponbare |
| GSM534610 | Root_27DAT_12:00_rep2 | Nipponbare | |
| GSM534611 | Root_27DAT_12:00_rep3 | Nipponbare | |
| GSM534612 | Root_27DAT_24:00_rep1 | Root_vegetative_00:00 | Nipponbare |
| GSM534613 | Root_27DAT_24:00_rep2 | Nipponbare | |
| GSM534614 | Root_27DAT_24:00_rep3 | Nipponbare | |
| GSM534615 | Root_76DAT_12:00_rep1 | Root_reproductive_12:00 | Nipponbare |
| GSM534616 | Root_76DAT_12:00_rep2 | Nipponbare | |
| GSM534617 | Root_76DAT_12:00_rep3 | Nipponbare | |
| GSM534618 | Root_76DAT_24:00_rep1 | Root_reproductive_00:00 | Nipponbare |
| GSM534619 | Root_76DAT_24:00_rep2 | Nipponbare | |
| GSM534620 | Root_76DAT_24:00_rep3 | Nipponbare | |
| GSM534621 | Stem_83DAT_12:00_rep1 | Stem_reproductive_12:00* | Nipponbare |
| GSM534622 | Stem_83DAT_12:00_rep2 | Nipponbare | |
| GSM534623 | Stem_83DAT_12:00_rep3 | Nipponbare | |
| GSM534624 | Stem_83DAT_24:00_rep1 | Stem_reproductive_00:00 | Nipponbare |
| GSM534625 | Stem_83DAT_24:00_rep2 | Nipponbare | |
| GSM534626 | Stem_83DAT_24:00_rep3 | Nipponbare | |
| GSM534627 | Stem_90DAT_12:00_rep1 | Stem_ripening_12:00 | Nipponbare |
| GSM534628 | Stem_90DAT_12:00_rep2 | Nipponbare | |
| GSM534629 | Stem_90DAT_12:00_rep3 | Nipponbare | |
| GSM534630 | Stem_90DAT_24:00_rep1 | Stem_ripening_00:00 | Nipponbare |
| GSM534631 | Stem_90DAT_24:00_rep2 | Nipponbare | |
| GSM534632 | Stem_90DAT_24:00_rep3 | Nipponbare | |
| GSM534633 | Inflorescence_0.6-1.0 mm_rep1 | Inflorescence_0.6-1.0 mm* | Nipponbare |
| GSM534634 | Inflorescence_0.6-1.0 mm_rep2 | Nipponbare | |
| GSM534635 | Inflorescence_0.6-1.0 mm_rep3 | Nipponbare | |
| GSM534636 | Inflorescence_3.0-4.0 mm_rep1 | Inflorescence_3.0-4.0 mm | Nipponbare |
| GSM534637 | Inflorescence_3.0-4.0 mm_rep2 | Nipponbare | |
| GSM534638 | Inflorescence_3.0-4.0 mm_rep3 | Nipponbare | |
| GSM534639 | Inflorescence_5.0-10 mm_rep1 | Inflorescence_5.0-10.0 mm | Nipponbare |
| GSM534640 | Inflorescence_5.0-10 mm_rep2 | Nipponbare | |
| GSM534641 | Inflorescence_5.0-10 mm_rep3 | Nipponbare | |
| GSM534642 | Anther_0.3-0.6 mm_rep1 | Anther_0.3-0.6 mm* | Nipponbare |
| GSM534643 | Anther_0.3-0.6 mm_rep2 | Nipponbare | |
| GSM534644 | Anther_0.7-1.0 mm_rep1 | Anther_0.7-1.0 mm* | Nipponbare |
| GSM534645 | Anther_0.7-1.0 mm_rep2 | Nipponbare | |
| GSM534646 | Anther_0.7-1.0 mm_rep3 | Nipponbare | |
| GSM534647 | Anther_1.2-1.5 mm_rep1 | Anther_1.2-1.5 mm* | Nipponbare |
| GSM534648 | Anther_1.2-1.5 mm_rep2 | Nipponbare | |
| GSM534649 | Anther_1.2-1.5 mm_rep3 | Nipponbare | |
| GSM534650 | Anther_1.6-2.0 mm_rep1 | Anther_1.6-2.0 mm* | Nipponbare |
| GSM534651 | Anther_1.6-2.0 mm_rep2 | Nipponbare | |
| GSM534652 | Anther_1.6-2.0 mm_rep3 | Nipponbare | |
| GSM534653 | Pistil_05-10 cm inflorescence_rep1 | Pistil_5-10 cm panicle* | Nipponbare |
| GSM534654 | Pistil_05-10 cm inflorescence_rep2 | Nipponbare | |
| GSM534655 | Pistil_05-10 cm inflorescence_rep3 | Nipponbare | |
| GSM534656 | Pistil_10-14 cm inflorescence_rep1 | Pistil_10-14 cm panicle | Nipponbare |
| GSM534657 | Pistil_10-14 cm inflorescence_rep2 | Nipponbare | |
| GSM534658 | Pistil_10-14 cm inflorescence_rep3 | Nipponbare | |
| GSM534659 | Pistil_14-18 cm inflorescence_rep1 | Pistil_14-18 cm panicle | Nipponbare |
| GSM534660 | Pistil_14-18 cm inflorescence_rep2 | Nipponbare | |
| GSM534661 | Pistil_14-18 cm inflorescence_rep3 | Nipponbare | |
| GSM534662 | Lemma_1.5-2.0 mm floret_rep1 | Lemma_1.5-2.0 mm floret* | Nipponbare |
| GSM534663 | Lemma_1.5-2.0 mm floret_rep2 | Nipponbare | |
| GSM534664 | Lemma_1.5-2.0 mm floret_rep3 | Nipponbare | |
| GSM534665 | Palea_1.5-2.0 mm floret_rep1 | Palea_1.5-2.0 mm floret* | Nipponbare |
| GSM534666 | Palea_1.5-2.0 mm floret_rep2 | Nipponbare | |
| GSM534667 | Palea_1.5-2.0 mm floret_rep3 | Nipponbare | |
| GSM534668 | Lemma_4.0-5.0 mm floret_rep1 | Lemma_4.0-5.0 mm floret | Nipponbare |
| GSM534669 | Lemma_4.0-5.0 mm floret_rep2 | Nipponbare | |
| GSM534670 | Lemma_4.0-5.0 mm floret_rep3 | Nipponbare | |
| GSM534671 | Palea_4.0-5.0 mm floret_rep1 | Palea_4.0-5.0 mm floret | Nipponbare |
| GSM534672 | Palea_4.0-5.0 mm floret_rep2 | Nipponbare | |
| GSM534673 | Palea_4.0-5.0 mm floret_rep3 | Nipponbare | |
| GSM534674 | Lemma_7.0 mm floret_rep1 | Lemma_7.0 mm floret | Nipponbare |
| GSM534675 | Lemma_7.0 mm floret_rep2 | Nipponbare | |
| GSM534676 | Lemma_7.0 mm floret_rep3 | Nipponbare | |
| GSM534677 | Palea_7.0 mm floret_rep1 | Palea_7.0 mm floret | Nipponbare |
| GSM534678 | Palea_7.0 mm floret_rep2 | Nipponbare | |
| GSM534679 | Palea_7.0 mm floret_rep3 | Nipponbare | |
| GSM534680 | Ovary_01 DAF_rep1 | Ovary_01 DAF* | Nipponbare |
| GSM534681 | Ovary_01 DAF_rep2 | Nipponbare | |
| GSM534682 | Ovary_01 DAF_rep3 | Nipponbare | |
| GSM534683 | Ovary_03 DAF_rep1 | Ovary_03 DAF | Nipponbare |
| GSM534685 | Ovary_03 DAF_rep2 | Nipponbare | |
| GSM534686 | Ovary_03 DAF_rep3 | Nipponbare | |
| GSM534687 | Ovary_05 DAF_rep1 | Ovary_05DAF | Nipponbare |
| GSM534688 | Ovary_05 DAF_rep2 | Nipponbare | |
| GSM534689 | Ovary_05 DAF_rep3 | Nipponbare | |
| GSM534690 | Ovary_07 DAF_rep1 | Ovary_07 DAF | Nipponbare |
| GSM534691 | Ovary_07 DAF_rep2 | Nipponbare | |
| GSM534692 | Ovary_07 DAF_rep3 | Nipponbare | |
| GSM534693 | Embryo_07 DAF_rep1 | Embryo_07 DAF* | Nipponbare |
| GSM534694 | Embryo_07 DAF_rep2 | Nipponbare | |
| GSM534695 | Embryo_07 DAF_rep3 | Nipponbare | |
| GSM534696 | Embryo_10 DAF_rep1 | Embryo_10 DAF | Nipponbare |
| GSM534697 | Embryo_10 DAF_rep2 | Nipponbare | |
| GSM534698 | Embryo_10 DAF_rep3 | Nipponbare | |
| GSM534699 | Embryo_14 DAF_rep1 | Embryo_14 DAF | Nipponbare |
| GSM534700 | Embryo_14 DAF_rep2 | Nipponbare | |
| GSM534701 | Embryo_14 DAF_rep3 | Nipponbare | |
| GSM534702 | Embryo_28 DAF_rep1 | Embryo_28 DAF | Nipponbare |
| GSM534703 | Embryo_28 DAF_rep2 | Nipponbare | |
| GSM534704 | Embryo_28 DAF_rep3 | Nipponbare | |
| GSM534705 | Embryo_42 DAF_rep1 | Embryo_42 DAF | Nipponbare |
| GSM534706 | Embryo_42 DAF_rep2 | Nipponbare | |
| GSM534707 | Embryo_42 DAF_rep3 | Nipponbare | |
| GSM534708 | Endosperm_07 DAF_rep1 | Endosperm_07 DAF* | Nipponbare |
| GSM534709 | Endosperm_07 DAF_rep2 | Nipponbare | |
| GSM534710 | Endosperm_07 DAF_rep3 | Nipponbare | |
| GSM534711 | Endosperm_10 DAF_rep1 | Endosperm_10 DAF | Nipponbare |
| GSM534712 | Endosperm_10 DAF_rep2 | Nipponbare | |
| GSM534713 | Endosperm_10 DAF_rep3 | Nipponbare | |
| GSM534714 | Endosperm_14 DAF_rep1 | Endosperm_14 DAF | Nipponbare |
| GSM534715 | Endosperm_14 DAF_rep2 | Nipponbare | |
| GSM534716 | Endosperm_14 DAF_rep3 | Nipponbare | |
| GSM534717 | Endosperm_28 DAF_rep1 | Endosperm_28 DAF | Nipponbare |
| GSM534718 | Endosperm_28 DAF_rep2 | Nipponbare | |
| GSM534719 | Endosperm_28 DAF_rep3 | Nipponbare | |
| GSM534720 | Endosperm_42 DAF_rep1 | Endosperm_42 DAF | Nipponbare |
| GSM534721 | Endosperm_42 DAF_rep2 | Nipponbare | |
| GSM534722 | Endosperm_42 DAF_rep3 | Nipponbare | |
| GSM722590 | Pre_anther_rep1 | Anther at premeiosis stage, LMD sample* | Nipponbare |
| GSM722591 | Pre_anther_rep2 | Nipponbare | |
| GSM722592 | Pre_anther_rep3 | Nipponbare | |
| GSM722593 | MEI-microspore-rep1 | Microspore at meiosis stage, LMD sample* | Nipponbare |
| GSM722594 | MEI-microspore-rep2 | Nipponbare | |
| GSM722595 | MEI-microspore-rep3 | Nipponbare | |
| GSM722596 | MEI-microspore-rep4 | Nipponbare | |
| GSM722597 | TET-microspore-rep1 | Microspore at tetrad stage, LMD sample* | Nipponbare |
| GSM722598 | TET-microspore-rep2 | Nipponbare | |
| GSM722599 | TET-microspore-rep3 | Nipponbare | |
| GSM722600 | UN-microspore-rep1 | Microspore at uninuclear stage, LMD sample* | Nipponbare |
| GSM722601 | UN-microspore-rep2 | Nipponbare | |
| GSM722602 | UN-microspore-rep3 | Nipponbare | |
| GSM722603 | BC-pollen-rep1 | Pollen at bicelluar stage,LMD sample* | Nipponbare |
| GSM722604 | BC-pollen-rep2 | Nipponbare | |
| GSM722605 | BC-pollen-rep3 | Nipponbare | |
| GSM722606 | BC-pollen-rep4 | Nipponbare | |
| GSM722607 | BC-pollen-rep5 | Nipponbare | |
| GSM722608 | BC-pollen-rep6 | Nipponbare | |
| GSM722609 | BC-pollen-rep7 | Nipponbare | |
| GSM722610 | BC-pollen-rep8 | Nipponbare | |
| GSM722611 | TC-pollen-rep1 | Pollen at tricelluar stage, LMD sample* | Nipponbare |
| GSM722612 | TC-pollen-rep2 | Nipponbare | |
| GSM722613 | TC-pollen-rep3 | Nipponbare | |
| GSM722614 | MEI-tapetum-rep1 | Tapetum at meiosis stage, LMD sample* | Nipponbare |
| GSM722615 | MEI-tapetum-rep2 | Nipponbare | |
| GSM722616 | MEI-tapetum-rep3 | Nipponbare | |
| GSM722617 | TET-tapetum-rep1 | Tapetum at tetrad stage, LMD sample* | Nipponbare |
| GSM722618 | TET-tapetum-rep2 | Nipponbare | |
| GSM722619 | TET-tapetum-rep3 | Nipponbare | |
| GSM722620 | UN-tapetum-rep1 | Tapetum at uninuclear stage, LMD sample* | Nipponbare |
| GSM722621 | UN-tapetum-rep2 | Nipponbare | |
| GSM722622 | UN-tapetum-rep3 | Nipponbare | |
