Difference between revisions of "Ontology for Biomedical Investigations"
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===OBI-PO-CL Conference Call=== | ===OBI-PO-CL Conference Call=== | ||
Date: Thurs 10th June 5pm British Summer Time/ 9 am Pacific/ noon Eastern? | Date: Thurs 10th June 5pm British Summer Time/ 9 am Pacific/ noon Eastern? | ||
| + | |||
| + | Present: OBI: Helen Parkinson (EBI); POC: Laurel Cooper (OSU), Ramona Walls (NYBG),Pankaj Jaiswal (OSU); CL: Alexander Diehl, Terry Meehan (Jackson Laboratory) | ||
===Agenda=== | ===Agenda=== | ||
1. Update on CL meeting (for those who weren't present) TM/AD | 1. Update on CL meeting (for those who weren't present) TM/AD | ||
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2. Identification of terms in scope for OBI (CL/PO) PK/RM/LC | 2. Identification of terms in scope for OBI (CL/PO) PK/RM/LC | ||
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3. Presentation relevant OBI structure - BP/HP | 3. Presentation relevant OBI structure - BP/HP | ||
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4. Propose design pattern for these in OBI BP/HP | 4. Propose design pattern for these in OBI BP/HP | ||
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5. Create OBI tracker items BP/HP | 5. Create OBI tracker items BP/HP | ||
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6. Consider consequences for source ontologies - all | 6. Consider consequences for source ontologies - all | ||
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| + | Slides of Agenda items and discussion points: | ||
| + | [[Media:Obi_cells_2_(HP_6-10-10).pdf ]] | ||
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| + | |||
| + | ===Action items from the call:=== | ||
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| + | AI: all to share resources - links etc | ||
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| + | e.g. dev PO http://dev.plantontology.org - PO dev version | ||
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| + | OBI Tracker - http://sourceforge.net/tracker/?group_id=177891&atid=886178 | ||
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| + | Instructions for OBI SVN - feel free to email HP for assistance | ||
| + | |||
| + | http://obi-ontology.org/page/Tutorials | ||
| + | |||
| + | AI: cc supernatant could be a part of cell culture HP to raise in tracker - PJ | ||
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| + | AI: CL/PO will generate term list for OBI | ||
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| + | AI: HP will place these in OBI and add tracker when we have a list of proposed terms | ||
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| + | AI: HP will report back to the OBI dev list progress< | ||
| + | |||
| + | General comment we need more hierarchy under processed material, noted. | ||
| + | |||
| + | AI: not discussed on call, but comments welcome on OBI cell related hierarchy - by email, or by tracker. | ||
Latest revision as of 18:15, 10 June 2010
OBI-PO-CL Conference Call
Date: Thurs 10th June 5pm British Summer Time/ 9 am Pacific/ noon Eastern?
Present: OBI: Helen Parkinson (EBI); POC: Laurel Cooper (OSU), Ramona Walls (NYBG),Pankaj Jaiswal (OSU); CL: Alexander Diehl, Terry Meehan (Jackson Laboratory)
Agenda
1. Update on CL meeting (for those who weren't present) TM/AD
2. Identification of terms in scope for OBI (CL/PO) PK/RM/LC
3. Presentation relevant OBI structure - BP/HP
4. Propose design pattern for these in OBI BP/HP
5. Create OBI tracker items BP/HP
6. Consider consequences for source ontologies - all
Slides of Agenda items and discussion points: Media:Obi_cells_2_(HP_6-10-10).pdf
Action items from the call:
AI: all to share resources - links etc
e.g. dev PO http://dev.plantontology.org - PO dev version
OBI Tracker - http://sourceforge.net/tracker/?group_id=177891&atid=886178
Instructions for OBI SVN - feel free to email HP for assistance
http://obi-ontology.org/page/Tutorials
AI: cc supernatant could be a part of cell culture HP to raise in tracker - PJ
AI: CL/PO will generate term list for OBI
AI: HP will place these in OBI and add tracker when we have a list of proposed terms
AI: HP will report back to the OBI dev list progress<
General comment we need more hierarchy under processed material, noted.
AI: not discussed on call, but comments welcome on OBI cell related hierarchy - by email, or by tracker.
