Difference between revisions of "New terms and obsolete terms Release 19"

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=New terms, PAE branch=
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Back to [[Release_19]]
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Jump to [[Details_of_Changes_in_PO_Release_19]].
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=New terms- PAE branch=
 
sepal epidermis giant cell (PO:0025499)
 
sepal epidermis giant cell (PO:0025499)
  
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=Renamed terms, PAE branch=
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archegonium central cell (PO:0025509)
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basal axillary shoot (PO:0005001) > basal axillary shoot system
+
 
 +
archegonium initial cell (PO:0025510)
 +
 
 +
petal spur (PO:0025511)
 +
 
 +
corolla spur (PO:0025512)
 +
 
 +
organ lamina (PO:0025513)
 +
 
 +
phyllome lamina lobe (PO:0025514)
 +
 
 +
phyllome lamina tooth (PO:0025515)
 +
 
 +
phyllome lamina crena (PO:0025516)
 +
 
 +
leaf lamina lobe (PO:0025517)
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 +
leaf lamina tooth (PO:0025518)
 +
 
 +
leaf lamina crena (PO:0025519)
 +
 
 +
tuber (PO:0025522)
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 +
tuberous root (PO:0025523)
 +
 
 +
leaf lamina intramarginal vein (PO:0025520)
 +
 
 +
unicellular plant gametangium (PO:0025521)
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 +
spermatogenous cell (PO:0025525)
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 +
body cell (PO:0025526)
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 +
prothallial cell (PO:0025533)
 +
 
 +
ventral canal cell (PO:0025524)
 +
 
 +
20
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=New terms- Plant Structure Development Stage branch=
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* whole plant fruit development stage (PO:0025500)
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* fruit initiation stage (PO:0025503)
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 +
* fruit formation stage (PO:0025501)
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** fruit size up to 10% stage (PO:0025504)
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** fruit size 10 to 30% stage (PO:0025505)
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** fruit size 30 to 50% stage (PO:0025506)
 +
** fruit size 50 to 70% stage (PO:0025507)
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** fruit size 70% to final size stage (PO:0025508)
 +
 
 +
* shoot system development stage (PO:0025527)
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** bud development stage (PO:0025528)
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** bud dormancy stage (PO:0025529)
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** bud swell stage (PO:0025531)
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** bud burst stage PO:0025532
 +
 
 +
* reproductive shoot system development stage (PO:0025530)
 +
 
 +
* fruit development stage (PO:0001002)
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** fruit ripening stage (PO:0025502)
 +
 
 +
=Renamed terms (same PO ID)=
 +
==PAE branch==
 +
basal axillary shoot > basal axillary shoot system (PO:0005001)
 +
 
 +
leaf anlagen  > vascular leaf anlagen (PO:0025431)
 +
 
 +
megagametophyte cell > embryo sac cell (PO:0025026)
 +
 
 +
tuber > shoot axis tuber (PO:0004543)
 +
 
 +
tuberous root > tuberous root tuber (PO:0025476)
 +
 
 +
plant gametangium > multicellular plant gametangium (PO:0025124)
 +
 
 +
central cell > embryo sac central cell (PO:0020090)
 +
 
 +
shoot meristem > shoot system meristem (PO:0006079)
 +
 
 +
tuber axilllary bud meristem > shoot axis tuber axillary bud meristem (PO:0025068)
 +
 
 +
tuber axillary vegetative bud > shoot axis tuber axillary vegetative bud (PO:0025040
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 +
tuber epidermis > shoot axis tuber epidermis (PO:0025046)
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 +
tuber periderm > shoot axis tuber periderm
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 +
==PSDS branch==
 +
Child terms of '''whole plant fruit development stage''' (PO:0025500):
 +
 
 +
* 5 fruit formation stage > whole plant fruit formation stage (PO:0007042)
 +
** FF.00 fruit size up to 10% stage > whole plant fruit formation stage up to 10% (PO:0007032)
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** FF.01 fruit size 10 to 30% stage > whole plant fruit formation stage 10 to 30%  (PO:0007009)
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** FF.02 fruit size 30 to 50% stage > whole plant fruit formation stage 30 to 50%  (PO:0007029)
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** FF.03 fruit size 50 to 70% stage > whole plant fruit formation stage 50 to 70%  (PO:0007007)
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** FF.04 fruit size 70% to final size stage > whole plant fruit formation stage 70% to final size  (PO:0007027)
  
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leaf anlagen (PO:0025431) > vascular leaf anlagen
+
* 6 ripening stage > whole plant fruit ripening stage (PO:0007010)
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** FR.00 beginning of fruit ripening stage  > beginning of whole plant fruit ripening stage (PO:0007036)
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** FR.01 early stage of fruit ripening  > early whole plant fruit ripening stage (PO:0007001)
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** FR.02 mid stage of fruit ripening > mid whole plant fruit ripening stage (PO:0007031)
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** FR.03 late stage of fruit ripening  > late whole plant fruit ripening stage (PO:0007050)
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** FR.04 fruit ripening complete stage > whole plant fruit ripening complete stage  (PO:0007038)
  
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=New terms, PSDS branch=
 
  
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=Renamed terms, PSDS branch=
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* 3 inflorescence detectable stage > whole plant inflorescence detectable stage (PO:0007047)
  
−
5 fruit formation stage (PO:0007042) > whole plant fruit formation stage
+
* 4 flowering stage > whole plant flowering stage (PO:0007016)
  
−
6 ripening stage (PO:0007010) > whole plant fruit ripening stage
+
* collective plant structure development stage > collective plant organ structure development stage (PO:0025338)
  
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3 inflorescence detectable stage (PO:0007047) to whole plant inflorescence detectable stage
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=Obsoleted PAE terms=
 +
* non-articulated laticifer ([http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0005007&session_id=9509b1356034151 PO:0005007]). This term was made obsolete because a non-articulated laticifer is not a tissue type but consists of a single cell. Use non-articulated laticifer cell ([http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0006222&session_id=2583b1357326304 PO:0006222]) instead.
  
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4 flowering stage (PO:0007016) > whole plant flowering stage
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* laticifer ([http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0005053&session_id=9509b1356034151&show_associations=list PO:0005053]). This term was made obsolete because it had only one subclass. Consider articulated laticifer cell ([http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0006221&session_id=9509b1356034151 PO:0006221]) or non-articulated laticifer cell ([http://www.plantontology.org/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=PO:0006222&session_id=2583b1357326304 PO:0006222]) instead.

Latest revision as of 20:08, 4 January 2013

Back to Release_19

Jump to Details_of_Changes_in_PO_Release_19.

New terms- PAE branch

sepal epidermis giant cell (PO:0025499)

archegonium central cell (PO:0025509)

archegonium initial cell (PO:0025510)

petal spur (PO:0025511)

corolla spur (PO:0025512)

organ lamina (PO:0025513)

phyllome lamina lobe (PO:0025514)

phyllome lamina tooth (PO:0025515)

phyllome lamina crena (PO:0025516)

leaf lamina lobe (PO:0025517)

leaf lamina tooth (PO:0025518)

leaf lamina crena (PO:0025519)

tuber (PO:0025522)

tuberous root (PO:0025523)

leaf lamina intramarginal vein (PO:0025520)

unicellular plant gametangium (PO:0025521)

spermatogenous cell (PO:0025525)

body cell (PO:0025526)

prothallial cell (PO:0025533)

ventral canal cell (PO:0025524)

20

New terms- Plant Structure Development Stage branch

  • whole plant fruit development stage (PO:0025500)
  • fruit initiation stage (PO:0025503)
  • fruit formation stage (PO:0025501)
    • fruit size up to 10% stage (PO:0025504)
    • fruit size 10 to 30% stage (PO:0025505)
    • fruit size 30 to 50% stage (PO:0025506)
    • fruit size 50 to 70% stage (PO:0025507)
    • fruit size 70% to final size stage (PO:0025508)
  • shoot system development stage (PO:0025527)
    • bud development stage (PO:0025528)
    • bud dormancy stage (PO:0025529)
    • bud swell stage (PO:0025531)
    • bud burst stage PO:0025532
  • reproductive shoot system development stage (PO:0025530)
  • fruit development stage (PO:0001002)
    • fruit ripening stage (PO:0025502)

Renamed terms (same PO ID)

PAE branch

basal axillary shoot > basal axillary shoot system (PO:0005001)

leaf anlagen > vascular leaf anlagen (PO:0025431)

megagametophyte cell > embryo sac cell (PO:0025026)

tuber > shoot axis tuber (PO:0004543)

tuberous root > tuberous root tuber (PO:0025476)

plant gametangium > multicellular plant gametangium (PO:0025124)

central cell > embryo sac central cell (PO:0020090)

shoot meristem > shoot system meristem (PO:0006079)

tuber axilllary bud meristem > shoot axis tuber axillary bud meristem (PO:0025068)

tuber axillary vegetative bud > shoot axis tuber axillary vegetative bud (PO:0025040

tuber epidermis > shoot axis tuber epidermis (PO:0025046)

tuber periderm > shoot axis tuber periderm

PSDS branch

Child terms of whole plant fruit development stage (PO:0025500):

  • 5 fruit formation stage > whole plant fruit formation stage (PO:0007042)
    • FF.00 fruit size up to 10% stage > whole plant fruit formation stage up to 10% (PO:0007032)
    • FF.01 fruit size 10 to 30% stage > whole plant fruit formation stage 10 to 30% (PO:0007009)
    • FF.02 fruit size 30 to 50% stage > whole plant fruit formation stage 30 to 50% (PO:0007029)
    • FF.03 fruit size 50 to 70% stage > whole plant fruit formation stage 50 to 70% (PO:0007007)
    • FF.04 fruit size 70% to final size stage > whole plant fruit formation stage 70% to final size (PO:0007027)
  • 6 ripening stage > whole plant fruit ripening stage (PO:0007010)
    • FR.00 beginning of fruit ripening stage > beginning of whole plant fruit ripening stage (PO:0007036)
    • FR.01 early stage of fruit ripening > early whole plant fruit ripening stage (PO:0007001)
    • FR.02 mid stage of fruit ripening > mid whole plant fruit ripening stage (PO:0007031)
    • FR.03 late stage of fruit ripening > late whole plant fruit ripening stage (PO:0007050)
    • FR.04 fruit ripening complete stage > whole plant fruit ripening complete stage (PO:0007038)


  • 3 inflorescence detectable stage > whole plant inflorescence detectable stage (PO:0007047)
  • 4 flowering stage > whole plant flowering stage (PO:0007016)
  • collective plant structure development stage > collective plant organ structure development stage (PO:0025338)

Obsoleted PAE terms

  • non-articulated laticifer (PO:0005007). This term was made obsolete because a non-articulated laticifer is not a tissue type but consists of a single cell. Use non-articulated laticifer cell (PO:0006222) instead.
  • laticifer (PO:0005053). This term was made obsolete because it had only one subclass. Consider articulated laticifer cell (PO:0006221) or non-articulated laticifer cell (PO:0006222) instead.
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