Difference between revisions of "Details of Changes in PO Release 19"

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==New or modified relations, PAE==
 
==New or modified relations, PAE==
  
−
Removed incorrect relation peduncle part_of inflorescence (does not work for cases of single flowers).
+
===Removed:===
  
−
Changed relation leaf develops_from vascular leaf primordium to vascular leaf develops_from vascular leaf primordium.
+
* peduncle part_of inflorescence (incorrect relation, does not work for cases of single flowers)
  
−
Changed "archegonium egg cell part_of archegonium" to  "archegonium egg cell located_in archegonium" .
+
===Changed===
  
−
Added laticiferous cell (PO:0004005, obsolete) replaced by laticifer cell (PO:0025031).
+
* 'leaf develops_from vascular leaf primordium' to 'vascular leaf develops_from vascular leaf primordium
  
−
Moved lamina (PO:0025060) from is_a cardinal organ part to is_a cardinal part of multi-tissue plant structure, to allow for lamina on seeds and fruits.
+
* "archegonium egg cell part_of archegonium" to "archegonium egg cell located_in archegonium"
  
−
Added cross product to definition of cardinal organ part (is_a cardinal part of MTPS and part_of plant organ).
+
* petiole lamina (PO:0025129) moved to is_a lamina, instead of is_a leaf lamina.
 +
* lamina (PO:0025060) Moved from is_a cardinal organ part to is_a cardinal part of multi-tissue plant structure, (to allow for lamina on seeds and fruits)
  
−
Moved petiole lamina (PO:0025129) to is_a lamina, instead of is_a leaf lamina.
+
==Added:===
−
 
+
* cardinal organ part (is_a cardinal part of MTPS and part_of plant organ); added cross product to definition
−
Added organ margin (PO:0025005) part_of organ lamina, phyllome margin (PO:0025018) part_of phyllome lamina (latter as XP).
+
* organ margin (PO:0025005) part_of organ lamina
 +
* phyllome margin (PO:0025018) part_of phyllome lamina (latter as XP).
 +
* laticiferous cell (PO:0004005, obsolete) replaced_by laticifer cell (PO:0025031)
  
 
=Updated definitions and/or comments: PSDS terms=
 
=Updated definitions and/or comments: PSDS terms=

Revision as of 16:15, 29 October 2012

See also New_terms_and_obsolete_terms_Release_19

Back to Release_19

Modified or Updated definitions and/or comments: PAE terms

  • basal axillary shoot system (PO:0005001)
  • whole plant fruit formation stage (PO:0007042)
  • whole plant fruit ripening stage (PO:0007010)
  • whole plant flowering stage (PO:0007016)
  • embryo sac egg cell (PO:0025123)
  • embryo sac (PO:0025074)
  • embryo sac central cell (PO:0020090)
  • laticifer cell (PO:0025031)
  • articulated laticifer cell (PO:0006221)
  • non-articulated laticifer cell (PO:0006222)
  • articulated laticifer (PO:0005008)
  • gametophyte development stage (PO:0028003): removed the phrase "or fertilization" from the definition, added PO ids. Added new sentence to comment.
  • placenta (PO:0025078): made it broader (any interface between a gametophyte and a sporophyte with transfer cells)
  • second order inflorescence (PO:0025240): fixed def'm: changed second order inflorescence branch to "second order inflorescence axis", because that is the correct term name. Added PO ids

Renamed terms:

  • megagametophyte cell (PO:0025026) renamed to embryo sac cell; and defined using intersection_of relations.
  • leaf sinus (PO:0025384): Added comment that it can be rounded or angled.


New or modified relations, PAE

Removed:

  • peduncle part_of inflorescence (incorrect relation, does not work for cases of single flowers)

Changed

  • 'leaf develops_from vascular leaf primordium' to 'vascular leaf develops_from vascular leaf primordium
  • "archegonium egg cell part_of archegonium" to "archegonium egg cell located_in archegonium"
  • petiole lamina (PO:0025129) moved to is_a lamina, instead of is_a leaf lamina.
  • lamina (PO:0025060) Moved from is_a cardinal organ part to is_a cardinal part of multi-tissue plant structure, (to allow for lamina on seeds and fruits)

Added:=

  • cardinal organ part (is_a cardinal part of MTPS and part_of plant organ); added cross product to definition
  • organ margin (PO:0025005) part_of organ lamina
  • phyllome margin (PO:0025018) part_of phyllome lamina (latter as XP).
  • laticiferous cell (PO:0004005, obsolete) replaced_by laticifer cell (PO:0025031)

Updated definitions and/or comments: PSDS terms

Updated definition and comment of flower development stage (PO:0007615).

Updated definition and comment of fruit development stage.

Modified definition of collective plant organ structure development stage (PO:0025338) to include PO ids. Modified comment to include ids.

New or modified relations, PSDS

Made fruit development stage is_a plant structure development stage (instead of collective plant organ structure development stage).

Added relation collective plant organ structure development stage has_participant collective plant organ structure, using intersection_of tags.

Made whole plant fruit formation stage (PO:0007042) and whole plant fruit ripening stage (PO:0007010) subclasses of whole plant fruit development stage and updated their definitions.

Updated names and definitions of:

  • (PO:0007032) whole plant fruit formation stage up to 10%
  • (PO:0007009) whole plant fruit formation stage 10 to 30%
  • (PO:0007029) whole plant fruit formation stage 30 to 50%
  • (PO:0007007) whole plant fruit formation stage 50 to 70%
  • (PO:0007027) whole plant fruit formation stage 70% to final size
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