Difference between revisions of "Plant Trait Ontology"
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==anatomy and morphology related trait (TO:0000017)== | ==anatomy and morphology related trait (TO:0000017)== | ||
| − | + | current def'n: This category belongs to traits associated with changes in the anatomy or structure of the plant at organ, tissue or cellular level. | |
proposed def'n: A plant trait (TO:0000387) associated with a plant anatomical entity (PO:0000003) or a cellular component thereof. | proposed def'n: A plant trait (TO:0000387) associated with a plant anatomical entity (PO:0000003) or a cellular component thereof. | ||
| + | |||
| + | problem with this currently is that it does not include whole plant traits, but has children such as plant height (is_a shoot anatomy and morphology trait) | ||
| + | |||
| + | ==whole plant trait== | ||
| + | has been obsoleted, maybe we should consider bringing back? | ||
| + | |||
| + | ==shoot anatomy and morphology trait TO:0000077== | ||
| + | current def'n: Traits associated with changes in the anatomy or structure of the shoot and its parts. | ||
| + | |||
| + | |||
| + | proposed def'n: | ||
=Trait lists on Google docs= | =Trait lists on Google docs= | ||
Revision as of 07:09, 17 April 2012
This page will be a place to keep track of the work on developing the Plant Trait Ontology
New:
Call for papers: Knowledge Engineering and Ontology Development
Crop Plant Trait Ontology paper
Also: Ontologies and semantic technologies for agricultural knowledge in practice
Related Wiki Pages and Links:
Details about the plans for the Crop_Ontology_Workshop_at_OSU,_2012
Work on the wood traits: Goal_3._Wood_qualities_and_phenotypes
TO Tracker on SourceForge
Links to Collaborator Sites:
GCP Phenotype and Trait Ontology [1]
Ontology Issues
root term plant trait (TO:0000387)
need to fix definition of to include cellular components and biochemical traits
current def'n: This category belongs to traits associated with changes in the anatomy or structure of the plant at organ, tissue or cellular level.
proposed def'n: A plant trait (TO:0000387) associated with a plant anatomical entity (PO:0000003) or a cellular component thereof.
problem with this currently is that it does not include whole plant traits, but has children such as plant height (is_a shoot anatomy and morphology trait)
whole plant trait
has been obsoleted, maybe we should consider bringing back?
shoot anatomy and morphology trait TO:0000077
current def'n: Traits associated with changes in the anatomy or structure of the shoot and its parts.
proposed def'n:
Trait lists on Google docs
Triticeae Toolbox Traits for Wheat
Other useful links
Trait Ontology on Bioportal: TO
