Revision as of 14:56, 1 October 2015

Details of Changes to Release #21

- Drupal site is still missing some important features, such as the release page

- Introduce and announce the mirrored site at iPLant

See Plant_Ontology_Web_Site_Update:_2012 for more details of proposed revisions

PO:IDs in definitions working as links

- What is the status of the update to AmiGO 2.0?

- move files to live tag, update /trunk/ontology/OBO_format/Readme.txt

- file naming and which variations of the file to create for each release - check with cjm

- update translations synonyms- send to Ale and YY

@@ Line 41: / Line 41: @@
 - update translations synonyms- send to Ale and YY
-=For the next release:=
-==Continue revisions and adding new terms for wood ontology==
-''Most terms are in the PAE branch or for GO.''
-''Can continue to add annotations as we go along, as well.''
-==Potato Annotations==
-LC has been in contact with the group who published the [http://www.nature.com/nature/journal/v475/n7355/full/nature10158.html#/f4 potato genome paper] and they are interested in collaborating with us to assign ontology terms to the annotations.
-From Dr. Richard Finker (Wageningen, The Netherlands):
-"We are also interested to use trait ontologies to assist in candidate gene selection within regions of interest, I'm eager to discuss with you on the efforts of cross linking ontologies to biological relevant entities. e.g. a metabolite content trait to its e.g. chebi ontology ID, form which we could obtain info about the pathway."
-''This will go in the next release, do they have expression data- RNA Seq?''
-==Wood Annotations==
-[http://dendrome.ucdavis.edu/treegenes/ TreeGenes] and [http://www.fagaceae.org/ Fagaceae Genomics Web]
-==Annotations to soybean- [http://soybase.org/ SoyBase]==