Difference between revisions of "GCP Crop Ontology"
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Rosemary showed an introduction to the [http://pantheon.generationcp.org/index.php?option=com_content&task=section&id=7&Itemid=35 GCP Crop ontology website] and the layout of the [http://pantheon.generationcp.org/index.php?option=com_content&task=view&id=20&Itemid=37 Crop Ontology Domains]: | Rosemary showed an introduction to the [http://pantheon.generationcp.org/index.php?option=com_content&task=section&id=7&Itemid=35 GCP Crop ontology website] and the layout of the [http://pantheon.generationcp.org/index.php?option=com_content&task=view&id=20&Itemid=37 Crop Ontology Domains]: | ||
Revision as of 15:25, 6 May 2010
POC- Crop Ontology meeting, Webex Conference Call; Date: May 6th, 2010 1 pm (PDT)
In attendance: POC member: Laurel Cooper (OSU),Rosemary Shrestha- Generation Challenge Program, CIMMYT, Mexico,
Agenda:
1.Introduction and overview of the Crop Ontology-
Rosemary showed an introduction to the GCP Crop ontology website and the layout of the Crop Ontology Domains:
010-089 General Germplasm Ontology Ontology
090-099 Taxonomic Ontology
100-299 Plant Anatomy & Development Ontology
300-499 Phenotype and Trait Ontology Ontology
500-699 Structural and Functional Genomic Ontology
700-799 Location and Environmental Ontology
800-899 General Science Ontology
900-999 Other (Sub-domain or Site-Specific) Ontology
The overall goals of the Crop Ontology are to unify and connect the many databases. There are different ontologies for each of the species of interest rice, wheat, maize, banana, chickpea, sorghum. Within these ontologies, there are species-specific descriptions of plant anatomy and growth and development terms that can be browsed on the GCP - Crop Ontology Lookup Service.
2.Avenues of possible collaborative activity
Action Items:
