Difference between revisions of "Oryza sativa, IMP, Gramene Genes"

From Plant Ontology Wiki
Jump to navigationJump to search
Line 27: Line 27:
 
|0800010||AID1||Anther Indehiscence1||PO:0009051||spikelet||Anatomy||15247409||||
 
|0800010||AID1||Anther Indehiscence1||PO:0009051||spikelet||Anatomy||15247409||||
 
|-
 
|-
|0800010||AID1||Anther Indehiscence1||PO:0007073||2 formation of axillary shoot stage||Growth Stage||15247409||||
+
|0800010||AID1||Anther Indehiscence1||PO:0007073||2 formation of axillary shoot stage||Development||15247409||||
 
|-
 
|-
|0800010||AID1||Anther Indehiscence1||PO:0007016||whole plant flowering stage||Growth Stage||15247409||||
+
|0800010||AID1||Anther Indehiscence1||PO:0007016||whole plant flowering stage||Development||15247409||||
 
|-
 
|-
|
+
|60058||APO1||Aberrant Panicle Organization||PO:0000003||whole plant||Anatomy||20130422||||
 +
 
 
|-
 
|-
 +
PO:0000230
 +
PO:0006321
 +
PO:0006322
 +
PO:0009025
 +
PO:0009051
 +
PO:0009081
 
|
 
|
 
|-
 
|-

Revision as of 12:53, 13 August 2013

This dataset was annotated as part of the Plant Phenotype Pilot Project


Legends:

  1. Gene ID: Gramene gene locus ID
  2. Cultivar: Nipponbare
  3. Gene data: Derived from supplementary tables ST2-ST25
  4. PO:annotations: best match to the sample description in the following tables. If required the PO annotations to growth stages were done to #both the organ/structure specific development stages and the whole plant growth stages. Every sample has PO whole plant growth stage #annotations.

PO anatomy and growth stage annotations table:

PO:0000230 PO:0006321 PO:0006322 PO:0009025 PO:0009051 PO:0009081
GR_gene:ID Gene Symbol Gene Name PO:ID PO:Name PO:Aspect PMID: comments
0101319 APL1 ADP-glucose Pyrophosphorylase large subunit 1 PO:0009066 leaf sheath Anatomy 16275672
0800010 AID1 Anther Indehiscence1 PO:0000003 whole plant Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0005001 basal axillary shoot system Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0009051 spikelet Anatomy 15247409
0800010 AID1 Anther Indehiscence1 PO:0007073 2 formation of axillary shoot stage Development 15247409
0800010 AID1 Anther Indehiscence1 PO:0007016 whole plant flowering stage Development 15247409
60058 APO1 Aberrant Panicle Organization PO:0000003 whole plant Anatomy 20130422