Difference between revisions of "Oryza sativa, IMP, Gramene Genes"

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| align="center" style="background:#f0f0f0;"|'''Gene Symbol'''
 
| align="center" style="background:#f0f0f0;"|'''Gene Symbol'''
 
| align="center" style="background:#f0f0f0;"|'''Gene Name'''
 
| align="center" style="background:#f0f0f0;"|'''Gene Name'''
| align="center" style="background:#f0f0f0;"|'''PO:ID Anatomy '''
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| align="center" style="background:#f0f0f0;"|'''PO:ID'''
| align="center" style="background:#f0f0f0;"|'''PO:Name Anatomy'''
+
| align="center" style="background:#f0f0f0;"|'''PO:Name'''
| align="center" style="background:#f0f0f0;"|'''PO:ID growth stage'''
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| align="center" style="background:#f0f0f0;"|'''PO: Aspect'''
| align="center" style="background:#f0f0f0;"|'''PO:Name growth stage'''
 
 
| align="center" style="background:#f0f0f0;"|'''PMID:'''
 
| align="center" style="background:#f0f0f0;"|'''PMID:'''
 
| align="center" style="background:#f0f0f0;"|'''comments'''
 
| align="center" style="background:#f0f0f0;"|'''comments'''
 
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|0101319||APL1||ADP-glucose Pyrophosphorylase large subunit 1|| PO:0009066||leaf sheath||||||16275672||||
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|0101319||APL1||ADP-glucose Pyrophosphorylase large subunit 1|| PO:0009066||leaf sheath|| Anatomy||16275672||||
 
|-
 
|-
|0800010||AID1||Anther Indehiscence1||PO:0000003||PO:Name Anatomy||PO:ID growth stage||PO:Name growth stage||15247409||||
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|0800010||AID1||Anther Indehiscence1||PO:0000003||whole plant||PO:ID growth stage||PO:Name growth stage||15247409||||
 
|-
 
|-
|0800010||AID1||Anther Indehiscence1||PO:0000003||PO:Name Anatomy||PO:ID growth stage||PO:Name growth stage||15247409||||
+
|0800010||AID1||Anther Indehiscence1||PO:0005001||PO:Name Anatomy||PO:ID growth stage||PO:Name growth stage||15247409||||
 
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Revision as of 12:32, 13 August 2013

This dataset was annotated as part of the Plant Phenotype Pilot Project


Legends:

  1. Gene ID: Gramene gene locus ID
  2. Cultivar: Nipponbare
  3. Gene data: Derived from supplementary tables ST2-ST25
  4. PO:annotations: best match to the sample description in the following tables. If required the PO annotations to growth stages were done to #both the organ/structure specific development stages and the whole plant growth stages. Every sample has PO whole plant growth stage #annotations.

PO anatomy and growth stage annotations table:

GR_gene:ID Gene Symbol Gene Name PO:ID PO:Name PO: Aspect PMID: comments
0101319 APL1 ADP-glucose Pyrophosphorylase large subunit 1 PO:0009066 leaf sheath Anatomy 16275672
0800010 AID1 Anther Indehiscence1 PO:0000003 whole plant PO:ID growth stage PO:Name growth stage 15247409
0800010 AID1 Anther Indehiscence1 PO:0005001 PO:Name Anatomy PO:ID growth stage PO:Name growth stage 15247409