Summary of Changes to PO April 2012 - Revision history

Cooperl: /* other changes */

2012-06-14T02:36:43Z

other changes

Cooperl: /* Revised def'ns: */

2012-06-14T02:35:57Z

Revised def'ns:

Cooperl: /* other changes */

2012-06-14T02:35:42Z

other changes

Cooperl: /* Revised def'ns: */

2012-06-14T02:35:28Z

Revised def'ns:

Cooperl: /* Changes to coleoptile emergence stage (PO:0007045) and related terms: */

2012-04-11T23:30:38Z

Changes to coleoptile emergence stage (PO:0007045) and related terms:

Cooperl: /* Added relations: */

2012-04-11T23:22:14Z

Added relations:

Cooperl: /* Revised def'ns: */

2012-04-11T23:21:56Z

Revised def'ns:

Cooperl: /* Revised def'ns: */

2012-04-11T23:14:56Z

Revised def'ns:

Cooperl: /* Changes to coleoptile emergence and related terms */

2012-04-11T23:06:37Z

Changes to coleoptile emergence and related terms

Cooperl: /* Added relations: */

2012-04-11T23:04:52Z

Added relations:

← Older revision		Revision as of 02:36, 14 June 2012
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	*Changed ''phellem'' and ''phelloderm'' to part_of ''periderm'', instead of part_of ''shoot axis periderm'', because it can also be found in ''roots''.		*Changed ''phellem'' and ''phelloderm'' to part_of ''periderm'', instead of part_of ''shoot axis periderm'', because it can also be found in ''roots''.

		+	====Revised def'ns:====
	* Sporophyte vegetative stage (PO:0028002): A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote. Revised comment: Precedes the plant embyro stage (PO:0007631). Refers to the GO Biological Process term: fertilization (GO:0009566).		* Sporophyte vegetative stage (PO:0028002): A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote. Revised comment: Precedes the plant embyro stage (PO:0007631). Refers to the GO Biological Process term: fertilization (GO:0009566).

← Older revision		Revision as of 02:35, 14 June 2012
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	==Changes to radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045) and related terms:==		==Changes to radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045) and related terms:==

−	~~===Revised def'ns:===~~

	* coleoptile (PO:0020033): A plant organ (PO:0009008) that surrounds the plumule (PO:0020032) of a plant embryo (PO:0009009) or the emerging shoot apex (PO:0000037) of a seedling. (is_a plant organ).		* coleoptile (PO:0020033): A plant organ (PO:0009008) that surrounds the plumule (PO:0020032) of a plant embryo (PO:0009009) or the emerging shoot apex (PO:0000037) of a seedling. (is_a plant organ).

← Older revision		Revision as of 02:35, 14 June 2012
Line 103:		Line 103:

	*Changed ''phellem'' and ''phelloderm'' to part_of ''periderm'', instead of part_of ''shoot axis periderm'', because it can also be found in ''roots''.		*Changed ''phellem'' and ''phelloderm'' to part_of ''periderm'', instead of part_of ''shoot axis periderm'', because it can also be found in ''roots''.
		+
		+	* Sporophyte vegetative stage (PO:0028002): A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote. Revised comment: Precedes the plant embyro stage (PO:0007631). Refers to the GO Biological Process term: fertilization (GO:0009566).
		+
		+	* sporophyte development stage (PO:0028002), sporophyte vegetative stage (PO:0007134) and seedling development stage (PO:0007131) with Po ids.

	==Changes to radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045) and related terms:==		==Changes to radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045) and related terms:==

← Older revision		Revision as of 02:35, 14 June 2012
Line 107:		Line 107:

	===Revised def'ns:===		===Revised def'ns:===
−	* Sporophyte vegetative stage (PO:0028002): A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote. Revised comment: Precedes the plant embyro stage (PO:0007631). Refers to the GO Biological Process term: fertilization (GO:0009566).
−
−	* sporophyte development stage (PO:0028002), sporophyte vegetative stage (PO:0007134) and seedling development stage (PO:0007131) with Po ids.

	* coleoptile (PO:0020033): A plant organ (PO:0009008) that surrounds the plumule (PO:0020032) of a plant embryo (PO:0009009) or the emerging shoot apex (PO:0000037) of a seedling. (is_a plant organ).		* coleoptile (PO:0020033): A plant organ (PO:0009008) that surrounds the plumule (PO:0020032) of a plant embryo (PO:0009009) or the emerging shoot apex (PO:0000037) of a seedling. (is_a plant organ).

@@ Line 104: / Line 104: @@
 *Changed ''phellem'' and ''phelloderm'' to part_of ''periderm'', instead of part_of ''shoot axis periderm'', because it can also be found in ''roots''.
-==Changes to coleoptile emergence stage (PO:0007045) and related terms:==
+==Changes to radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045) and related terms:==
 ===Revised def'ns:===

← Older revision		Revision as of 23:22, 11 April 2012
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	* primary root develops from seedling radicle		* primary root develops from seedling radicle
		+
		+	* plant zygote stage (PO:0001097) is_a sporophyte development stage (PO:0028002)

	===Created new terms===		===Created new terms===

@@ Line 117: / Line 117: @@
 * plumule (PO:0020032): The shoot apex (PO:0000037) of the plant embryo (PO:0009009), above the cotyledonary node (PO:0025321).
-* cotyledon (PO:0020030), added new terms: embryo cotyledon (PO:0025470) and seedling cotyledon (PO:0025471)
+* cotyledon (PO:0020030): A vascular leaf (PO:0009025) formed at the first shoot node (PO:0005004) of a plant embryo (PO:0009009) or a seedling (PO:0000003). (added new child  terms: embryo cotyledon (PO:0025470) and seedling cotyledon (PO:0025471)).
-* radicle (PO:0020031), embryo radicle (PO:0025296) (is a embryo root), seedling radicle (PO:0025297)
+* radicle (PO:0020031): An embryo root (PO:0000045) that is the basal continuation of a hypocotyl (PO:0020100) in a plant embryo (PO:0009009) or a seedling (PO:0000003).
-* coleorhiza (PO:0020034), embryo coleorhiza (PO:0025288), seedling coleorhiza (PO:0025289)
+* embryo radicle (PO:0025296) (is_a embryo root), seedling radicle (PO:0025297)
-* hypocotyl (PO:0020100), embryo hypocotyl (PO:0025290) and seedling hypocotyl (PO:0025291)
+* coleorhiza (PO:0020034): A sheath-like plant organ (PO:0009008) that surrounds the radicle (PO:0020031) of a plant embryo (PO:0009009) or the emerging root (PO:0009005) of a seedling (PO:0000003).
-* epicotyl (PO:0020035), embryo epicotyl (PO:0025292) and seedling epicotyl (PO:0025293)
+* embryo coleorhiza (PO:0025288), seedling coleorhiza (PO:0025289)
 * plant embryo stage (PO:0007631) and plant embryo (PO:0009009): removed reference to cotyledons in pteridophytes, added Po ids and terms names.
 * Updated the comment on plant embryo (PO:0009009) to include the details of the end of the plant embryo stage in various taxa.
 * radicle emergence stage (PO:0007015): A root development stage (PO:0007520) during which a radicle (PO:0020031) emerges from the seed coat (PO:0009088). (part_of seed germination stage (PO:0007057)).

@@ Line 132: / Line 132: @@
 * Made plant zygote stage (PO:0001097) is_a sporophyte development stage (PO:0028002)
-* radicle emergence stage (PO:0007015), coleoptile emergence stage (PO:0007045), cotyledon emergence stage (PO:0007049), epicotyl emergence stage (PO:0007054), hypocotyl emergence stage (PO:0007043).  Made them all stages.  Added revised comments and Xrefs to SF.
+* radicle emergence stage (PO:0007015): A root development stage (PO:0007520) during which a radicle (PO:0020031) emerges from the seed coat (PO:0009088). (part_of seed germination stage (PO:0007057)).
 ===Added relations: ===

@@ Line 138: / Line 138: @@
 * seedling hypocotyl (PO:0025291) participates_in seedling development stage (PO:0007131)
-* plant zygote (PO:0000423) participates_in plant zygote stage.
+* plant zygote (PO:0000423) participates_in plant zygote stage
 ===Created new terms===