Cooperl: moved Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes to Preece et al, CGRB 2011

2011-11-07T23:45:53Z

moved Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes to Preece et al, CGRB 2011

Cooperl at 23:45, 7 November 2011

2011-11-07T23:45:22Z

Cooperl: Created page with ' Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes Authors: Justin Preece, Justin Elser, Pankaj Jaiswal Poster Abs…'

2011-11-07T23:44:05Z

Created page with ' Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes Authors: Justin Preece, Justin Elser, Pankaj Jaiswal Poster Abs…'

New page

Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes

Authors: Justin Preece, Justin Elser, Pankaj Jaiswal

Poster Abstract:

Two notable trends currently impacting biology curation are 1) the use of
wikis to input, store, and disseminate research data and 2) the development
of semantic technologies to facilitate higher-order data description and
exploration. These separate developments, when brought together, have the
potential to deliver on one promise of the "semantic web": structured,
self-described data used to further scientific research and analysis. The
Semantic MediaWiki extension (http://semantic-mediawiki.org/), when used in
conjunction with Semantic Forms
(http://www.mediawiki.org/wiki/Extension:Semantic_Forms), provides an avenue
to create a semantically-driven, community-powered research platform on the
web.

The Planteome Annotation Wiki implements these technology platforms to
provide a user interface for annotation on the web, personal user accounts, a
set of previously-curated annotations (from TAIR, Gramene, and the Plant
Ontology Consortium), and a rigorous semantic data structure. The wiki also
dynamically integrates data from other sites via web services: Gene Ontology
and Plant Ontology terms, PubMed references, and taxonomic data. A bulk
import utility accepting GAF annotation data has also been developed, and the
wiki provides multi-format import, export, and semantic browsing and search
capabilities. Future enhancements include an exploration of semantic
inferencing capabilities using ontologies, a curatorial approval mechanism,
and further data integration with other biowikis.

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−		+	Poster presented at the [http://conference.cgrb.oregonstate.edu/ 2011 CGRB Fall Conference], Oregon State University, September 18th-19th, 2011.

	Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes		Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes

← Older revision	Revision as of 23:45, 7 November 2011
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Preece et al, CGRB 2011 - Revision history

Cooperl: moved Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes to Preece et al, CGRB 2011

Cooperl at 23:45, 7 November 2011

Cooperl: Created page with ' Planteome Annotation Wiki: A Semantic Application for the Community Curation of Plant Genotypes and Phenotypes Authors: Justin Preece, Justin Elser, Pankaj Jaiswal Poster Abs…'