Plant Genome Resources Outreach Booth - Revision history

Preecej: /* Plant Ontology Consortium */

2011-07-25T18:47:01Z

Plant Ontology Consortium

Cooperl: /* The Bio-Array Resource for Plant Functional Genomics */

2011-07-08T17:36:00Z

The Bio-Array Resource for Plant Functional Genomics

Cooperl at 17:19, 29 June 2011

2011-06-29T17:19:46Z

Cooperl at 17:12, 29 June 2011

2011-06-29T17:12:32Z

Cooperl at 16:29, 18 October 2010

2010-10-18T16:29:12Z

Cooperl: /* See some photos from the Plant Biology Booth */

2010-10-12T00:04:06Z

See some photos from the Plant Biology Booth

Cooperl: /* The Bio-Array Resource for Plant Functional Genomics */

2010-10-12T00:03:19Z

The Bio-Array Resource for Plant Functional Genomics

Cooperl at 17:22, 28 September 2010

2010-09-28T17:22:51Z

Cooperl: /* Solanaceae Genomics Network */

2010-07-23T16:01:17Z

Solanaceae Genomics Network

Cooperl: /* Gramene */

2010-07-13T22:54:47Z

Gramene

@@ Line 10: / Line 10: @@
 ===Plant Ontology Consortium===
+[[File:PO_logo_wiki.png‎]]  '''See our web page for more information:  http://www.plantontology.org'''
 The main objective of the Plant Ontology Consortium (POC) is to develop, curate and share controlled vocabularies (ontologies) that describe plant structures and growth and developmental stages, providing a semantic framework for meaningful cross-species queries across databases. The Plant Ontology (PO) has been developed and maintained with the primary goal to facilitate and accommodate functional annotation efforts in plant databases and by the plant research community at large. As a part of the POC project, participating databases such as TAIR, NASC, Gramene and MaizeGDB have been using PO to describe expression patterns of genes and phenotypes of mutants and natural variants.

← Older revision		Revision as of 17:36, 8 July 2011
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	'''Visit this poster for more information as well: [http://abstracts.aspb.org/pb2010/public/P14/P14013.html Orthologous Gene Identification of Plant Species]'''		'''Visit this poster for more information as well: [http://abstracts.aspb.org/pb2010/public/P14/P14013.html Orthologous Gene Identification of Plant Species]'''
−

	===See some photos from the Plant Biology Booth===		===See some photos from the Plant Biology Booth===

← Older revision		Revision as of 17:19, 29 June 2011
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−	[[File:~~POC_logo_noTM~~.~~gif‎~~]] '''See our web page for more information: http://www.plantontology.org'''	+	[[File:POC logo noTM low.gif]] '''See our web page for more information: http://www.plantontology.org'''

	The main objective of the Plant Ontology Consortium (POC) is to develop, curate and share controlled vocabularies (ontologies) that describe plant structures and growth and developmental stages, providing a semantic framework for meaningful cross-species queries across databases. The Plant Ontology (PO) has been developed and maintained with the primary goal to facilitate and accommodate functional annotation efforts in plant databases and by the plant research community at large. As a part of the POC project, participating databases such as TAIR, NASC, Gramene and MaizeGDB have been using PO to describe expression patterns of genes and phenotypes of mutants and natural variants.		The main objective of the Plant Ontology Consortium (POC) is to develop, curate and share controlled vocabularies (ontologies) that describe plant structures and growth and developmental stages, providing a semantic framework for meaningful cross-species queries across databases. The Plant Ontology (PO) has been developed and maintained with the primary goal to facilitate and accommodate functional annotation efforts in plant databases and by the plant research community at large. As a part of the POC project, participating databases such as TAIR, NASC, Gramene and MaizeGDB have been using PO to describe expression patterns of genes and phenotypes of mutants and natural variants.

← Older revision		Revision as of 17:12, 29 June 2011
Line 11:		Line 11:


−	[[File:~~Poc_logo~~.~~gif~~]] '''See our web page for more information: http://www.plantontology.org'''	+	[[File:POC_logo_noTM.gif‎]] '''See our web page for more information: http://www.plantontology.org'''

	The main objective of the Plant Ontology Consortium (POC) is to develop, curate and share controlled vocabularies (ontologies) that describe plant structures and growth and developmental stages, providing a semantic framework for meaningful cross-species queries across databases. The Plant Ontology (PO) has been developed and maintained with the primary goal to facilitate and accommodate functional annotation efforts in plant databases and by the plant research community at large. As a part of the POC project, participating databases such as TAIR, NASC, Gramene and MaizeGDB have been using PO to describe expression patterns of genes and phenotypes of mutants and natural variants.		The main objective of the Plant Ontology Consortium (POC) is to develop, curate and share controlled vocabularies (ontologies) that describe plant structures and growth and developmental stages, providing a semantic framework for meaningful cross-species queries across databases. The Plant Ontology (PO) has been developed and maintained with the primary goal to facilitate and accommodate functional annotation efforts in plant databases and by the plant research community at large. As a part of the POC project, participating databases such as TAIR, NASC, Gramene and MaizeGDB have been using PO to describe expression patterns of genes and phenotypes of mutants and natural variants.

← Older revision		Revision as of 16:29, 18 October 2010
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	===See some photos from the Plant Biology Booth===		===See some photos from the Plant Biology Booth===
		+	[[File:ASPB-PGR Booth.jpg]]

		+	[[File:ASPB-PGR Booth2.jpg]]

		+	[[File:Dscf1403.jpg]]

		+	[[File:Dscf1402.jpg]]

	[[File:P1010014.JPG]]		[[File:P1010014.JPG]]

@@ Line 122: / Line 122: @@
 ''' And several other useful tools!'''
 ===See some photos from the Plant Biology Booth===
 [[File:P1010014.JPG]]
@@ Line 130: / Line 137: @@
 [[File:P1010016.JPG]]

← Older revision		Revision as of 00:03, 12 October 2010
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	''' And several other useful tools!'''		''' And several other useful tools!'''
		+
		+
		+	===See some photos from the Plant Biology Booth===
		+	[[File:P1010014.JPG]]
		+
		+	[[File:P1010015.JPG]]
		+
		+	[[File:P1010016.JPG]]

	'''Visit this poster for more information as well: [http://abstracts.aspb.org/pb2010/public/P14/P14013.html Orthologous Gene Identification of Plant Species]'''		'''Visit this poster for more information as well: [http://abstracts.aspb.org/pb2010/public/P14/P14013.html Orthologous Gene Identification of Plant Species]'''

← Older revision		Revision as of 17:22, 28 September 2010
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		+	[http://www.aspb.org/meetings/pb-2010/ Plant Biology 2010]
		+
	'''Visit a collection of plant genomics databases and projects with resources for sequenced genomes, ontology development, genetic mapping, functional annotation of genes, mutants and phenotypes, genetic diversity and bioinformatics tools. Representatives from the projects will be present to demonstrate tools for cutting-edge genomics and genetics research and to answer questions.'''		'''Visit a collection of plant genomics databases and projects with resources for sequenced genomes, ontology development, genetic mapping, functional annotation of genes, mutants and phenotypes, genetic diversity and bioinformatics tools. Representatives from the projects will be present to demonstrate tools for cutting-edge genomics and genetics research and to answer questions.'''
−

← Older revision		Revision as of 16:01, 23 July 2010
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	[[File:sgn_logo_icon.png]]'''http://solgenomics.net/'''		[[File:sgn_logo_icon.png]]'''http://solgenomics.net/'''

		+
		+	The [http://solgenomics.net/ SOL Genomics Network] is a Clade Oriented Database (COD) containing genomic, genetic, phenotypic and taxonomic information for species in the Euasterid clade, including the families [http://solgenomics.net/about/about_solanaceae.pl Solanaceae] (e.g. tomato, potato, eggplant, pepper, petunia) and Rubiaceae (coffee). Genomic information is presented in a comparative format and tied to other important plant model species such as Arabidopsis. SGN is also one of the bioinformatics centers involved in [http://solgenomics.net/genomes/Solanum_lycopersicum/genome_data.pl tomato genome sequencing].
		+
		+	One of the major efforts at SGN is linking Solanaceae phenotype information with the underlying genes, and subsequently the genome. As part of this goal, SGN puts the control over the information in the hands of [http://solgenomics.net/phenome/ community experts]. As a result, SGN annotations are more up-to-date, and richer with detailed descriptions and gene-to-phenotype cross links, than would otherwise be possible without a large curatorial staff

← Older revision		Revision as of 22:54, 13 July 2010
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−	Plan to attend the [http://www.aspb.org/pb-2010/specialevents.cfm#databases Plant Ontology and Gramene Gene Annotation Workshop]	+	'''Plan to attend the [http://www.aspb.org/pb-2010/specialevents.cfm#databases Plant Ontology and Gramene Gene Annotation Workshop] '''

	Saturday, July 31st, 8 am-12 pm, (pre-registration required)		Saturday, July 31st, 8 am-12 pm, (pre-registration required)