POC Conf. Call 5-21-13 - Revision history

Cooperl: Replaced content with 'No meeting this week'

2013-06-03T19:01:02Z

Replaced content with 'No meeting this week'

Cooperl: /* Meeting report:PR-PO-GO meeting, May 15-16th 2013 */

2013-05-13T16:36:56Z

Meeting report:PR-PO-GO meeting, May 15-16th 2013

Cooperl at 16:36, 13 May 2013

2013-05-13T16:36:38Z

Cooperl at 16:35, 13 May 2013

2013-05-13T16:35:03Z

Cooperl: Created page with 'POC meeting, Webex Conference Call; Date: Tuesday May 21st, 2013 10am PST/1pm EST In attendance: Absent: none =Items for discussion= - please see the [[Items_for_future_meeti…'

2013-05-13T16:34:03Z

Created page with 'POC meeting, Webex Conference Call; Date: Tuesday May 21st, 2013 10am PST/1pm EST In attendance: Absent: none =Items for discussion= - please see the [[Items_for_future_meeti…'

New page

POC meeting, Webex Conference Call; Date: Tuesday May 21st, 2013 10am PST/1pm EST

In attendance:
Absent: none

=Items for discussion=
- please see the [[Items_for_future_meetings]] page, will be moved here before the meeting

← Older revision		Revision as of 19:01, 3 June 2013
Line 1:		Line 1:
−	~~POC~~ meeting~~, Webex Conference Call; Date: Tuesday May 21st, 2013 10am PST/1pm EST~~	+	No meeting this week
−
−	~~In attendance:~~
−	~~Absent: none~~
−
−
−
−	~~=Items for discussion=~~
−	~~- please see the [[Items_for_future_meetings]] page, will be moved here before the meeting~~
−
−
−
−	~~==Meeting report:PRO-PO-GO meeting, May 15-16th 2013==~~
−	~~Please see~~ this ~~page for more information: [[PRO-PO-GO_Meeting]]~~
−
−	~~Location: Buffalo, NY Dates: May 15-16th, 2013.~~
−
−	*1. To inform members of the Protein, Plant, Gene Ontology communities of developments in each of these ontologies, and in related ontologies such as the CL (Cell), TO (Plant Trait), ENVO (Environment), PATO (Phenotype) and IDO-Plant (Plant Infectious Disease) ontologies. Specifically:
−	**a. To enhance the PO treatment of plant-related proteins
−	**b. To address issues concerning reuse of GO terms to describe plant-related proteins, for example as concerns treatment of plant life cycle and development stages
−	*2. To contribute to the [http://wiki.plantontology.org/index.php/The_cROP_(Common_Reference_Ontologies_for_Plants)_Initiative cROP] (Common Reference Ontologies for Plants) initiative
−	*3. To contribute to the ontological understanding of phenotype and disease in all model organisms.
−	*4. To identify potentially fruitful applications which enhanced ontology coordination might bring.
−
−	~~=Upcoming meetings and Presentations 2013:=~~
−
−	~~==1st International Workshop on Semantics for Biodiversity (S4BIODIV), Montpellier, 26-30 May 2013==~~
−	~~[http://semantic-biodiversity.mpl.ird.fr/ S4BIODIV]~~
−
−	~~[http://2013.eswc-conferences.org/join-participant-0/participant-eswc2013 Registration Information ESWC 2013]~~
−
−	~~Early Registration deadline March 17th~~
−
−	~~Agropolis Montpellier, the University of Montpellier and Bioversity are collaborating to organize a one-day workshop entitled 'Agrobiodiversity semantics' as part of the larger conference.~~
−
−	~~Held in parallel with the 10th [http://2013.eswc-conferences.org/ Extended Semantic Web Conference (ESWC 2013)]~~
−
−	~~Workshop date: May 27, 2013~~
−
−	~~==MONOCOTS V Meeting at NYBG, July 5th - 14th, 2013==~~
−
−	~~[http://www.regonline.com/builder/site/Default.aspx?EventID=1060172 MONOCOTS V]:~~
−
−	~~5th International Conference on Comparative Biology of Monocotyledons~~
−	~~Friday, July 05, 2013 7:00 AM -~~
−	~~Sunday, July 14, 2013 12:00 PM (Eastern Time)~~
−
−	~~The New York Botanical Garden & Fordham University~~
−
−
−	~~==ICBO 2013, Concordia University, Montreal, Quebec July 7th - 9th 2013==~~
−	~~4th International Conference on Biomedical Ontologies 2013 (ICBO2013)~~
−
−	~~Concordia University, Montreal, Quebec, July 7th - 9th 2013 [http://www.unbsj.ca/sase/csas/data/ws/icbo2013/cfp.html call for papers]~~
−
−	The conference aim is to foster discussion, exchange, and innovation in research and development in the areas Biomedical Ontology. Researchers and professionals from biology, medicine, computer science and engineering are invited to share their knowledge and experience.
−
−	~~The event is part of the [http://www.unbsj.ca/sase/csas/data/semantic-trilogy-2013/ Semantic Trilogy 2013] featuring:~~
−
−	* International Conference on Biomedical Ontologies (ICBO 2013)
−	* Canadian Semantic Web Symposium (CSWS 2013)
−	* Data Integration in the Life Sciences (DILS 2013)
−
−	Workshop on [https://sites.google.com/site/semsysbio/ Semantic Systems Biology 2013 (SSB2013)] will be held as part of the International Conference on Biomedical Ontologies (ICBO2013) at Concordia University, Montreal, Quebec, on July 7th, 2013. The event is part of the Semantic Trilogy 2013 (above)
−
−	~~Topics of interest include, but are not limited to:~~
−	*ontologies & terminologies for modeling computational biology
−	*ontologies & terminologies for simulation (and result data) in computational biology/medicine/neuroscience
−	*semantic web technologies for description, integration, query and discovery of models, simulations and result data
−	*semantic web technologies for biological data and analysis
−	*semantic annotations of bio-models
−	*applications of ontologies in computational systems biology/medicine/neuroscience
−	*semantic platforms for undertaking and visualizing simulation results
−
−	~~We welcome four types of submissions:~~
−	* short papers, up to 4 pages.
−	* long papers, up to 7 pages.
−	* position papers, up to 1 page.
−	* late breaking reports, up to 1 page.
−
−	~~See the ICBO website for further information on the submission types.~~
−
−	~~All submission are due on Monday, April 15 2013.~~
−	~~Notification of acceptance: May 6th, 2013~~
−
−	~~==Botanical Society Meeting July 27-31st New Orleans==~~
−
−	~~[http://www.2013.botanyconference.org/ BSA 2013]~~
−
−	~~- MAG is planning to present the work she has been doing with the images and slides, will circulate the abstract~~
−
−	~~=Next meeting scheduled for Tuesday, May 28th, 2013 at 10am Pacific/1pm Eastern=~~

@@ Line 11: / Line 11: @@
-==Meeting report:PR-PO-GO meeting, May 15-16th 2013==
+==Meeting report:PRO-PO-GO meeting, May 15-16th 2013==
 Please see this page for more information: [[PRO-PO-GO_Meeting]]
-Location: Buffalo, NY
+Location: Buffalo, NY  Dates: May 15-16th, 2013.
 *1. To inform members of the Protein, Plant, Gene Ontology communities of  developments in each of these ontologies, and in related ontologies such as the CL (Cell), TO (Plant Trait), ENVO (Environment), PATO (Phenotype) and IDO-Plant (Plant Infectious Disease) ontologies. Specifically:
@@ Line 24: / Line 22: @@
 *3. To contribute to the ontological understanding of phenotype and disease in all model organisms.
 *4. To identify potentially fruitful applications which enhanced ontology coordination might bring.
 =Upcoming meetings and Presentations 2013:=

@@ Line 11: / Line 11: @@
-==Meeting report: Phenotype RCN Plant Group Meeting- Ames, Iowa April 30th-May 3rd==
+==Meeting report:PR-PO-GO meeting, May 15-16th 2013==
 Please see this page for more information: [[PRO-PO-GO_Meeting]]
@@ Line 37: / Line 24: @@
 *3. To contribute to the ontological understanding of phenotype and disease in all model organisms.
 *4. To identify potentially fruitful applications which enhanced ontology coordination might bring.
 ==1st International Workshop on Semantics for Biodiversity (S4BIODIV), Montpellier, 26-30 May 2013==

← Older revision		Revision as of 16:35, 13 May 2013
Line 8:		Line 8:
	=Items for discussion=		=Items for discussion=
	- please see the [[Items_for_future_meetings]] page, will be moved here before the meeting		- please see the [[Items_for_future_meetings]] page, will be moved here before the meeting
		+
		+
		+
		+	==Meeting report: Phenotype RCN Plant Group Meeting- Ames, Iowa April 30th-May 3rd==
		+
		+	The Plant Phenotype Pilot Project involves Rice, Maize, Arabidopsis, soybean, Medicago and tomato mutant phenotypes annotated with EQ statements using PO, GO, PATO, EO and ChEBI.
		+
		+	The EQ statements are associated with the known genes in each species.
		+
		+	Starting the analysis phase looking at options of comparing between gene families, etc
		+
		+
		+	Plant PhenomeNet browser being developed: George Gkoutous, Anika
		+
		+	=Upcoming meetings and Presentations 2013:=
		+
		+	==PR-PO-GO meeting, May 15-16th 2013==
		+	Please see this page for more information: [[PRO-PO-GO_Meeting]]
		+
		+	Location: Buffalo, NY
		+
		+	Dates: May 15-16th, 2013.
		+
		+	*1. To inform members of the Protein, Plant, Gene Ontology communities of developments in each of these ontologies, and in related ontologies such as the CL (Cell), TO (Plant Trait), ENVO (Environment), PATO (Phenotype) and IDO-Plant (Plant Infectious Disease) ontologies. Specifically:
		+	**a. To enhance the PO treatment of plant-related proteins
		+	**b. To address issues concerning reuse of GO terms to describe plant-related proteins, for example as concerns treatment of plant life cycle and development stages
		+	*2. To contribute to the [http://wiki.plantontology.org/index.php/The_cROP_(Common_Reference_Ontologies_for_Plants)_Initiative cROP] (Common Reference Ontologies for Plants) initiative
		+	*3. To contribute to the ontological understanding of phenotype and disease in all model organisms.
		+	*4. To identify potentially fruitful applications which enhanced ontology coordination might bring.
		+
		+	==1st International Workshop on Semantics for Biodiversity (S4BIODIV), Montpellier, 26-30 May 2013==
		+	[http://semantic-biodiversity.mpl.ird.fr/ S4BIODIV]
		+
		+	[http://2013.eswc-conferences.org/join-participant-0/participant-eswc2013 Registration Information ESWC 2013]
		+
		+	Early Registration deadline March 17th
		+
		+	Agropolis Montpellier, the University of Montpellier and Bioversity are collaborating to organize a one-day workshop entitled 'Agrobiodiversity semantics' as part of the larger conference.
		+
		+	Held in parallel with the 10th [http://2013.eswc-conferences.org/ Extended Semantic Web Conference (ESWC 2013)]
		+
		+	Workshop date: May 27, 2013
		+
		+	==MONOCOTS V Meeting at NYBG, July 5th - 14th, 2013==
		+
		+	[http://www.regonline.com/builder/site/Default.aspx?EventID=1060172 MONOCOTS V]:
		+
		+	5th International Conference on Comparative Biology of Monocotyledons
		+	Friday, July 05, 2013 7:00 AM -
		+	Sunday, July 14, 2013 12:00 PM (Eastern Time)
		+
		+	The New York Botanical Garden & Fordham University
		+
		+
		+	==ICBO 2013, Concordia University, Montreal, Quebec July 7th - 9th 2013==
		+	4th International Conference on Biomedical Ontologies 2013 (ICBO2013)
		+
		+	Concordia University, Montreal, Quebec, July 7th - 9th 2013 [http://www.unbsj.ca/sase/csas/data/ws/icbo2013/cfp.html call for papers]
		+
		+	The conference aim is to foster discussion, exchange, and innovation in research and development in the areas Biomedical Ontology. Researchers and professionals from biology, medicine, computer science and engineering are invited to share their knowledge and experience.
		+
		+	The event is part of the [http://www.unbsj.ca/sase/csas/data/semantic-trilogy-2013/ Semantic Trilogy 2013] featuring:
		+
		+	* International Conference on Biomedical Ontologies (ICBO 2013)
		+	* Canadian Semantic Web Symposium (CSWS 2013)
		+	* Data Integration in the Life Sciences (DILS 2013)
		+
		+	Workshop on [https://sites.google.com/site/semsysbio/ Semantic Systems Biology 2013 (SSB2013)] will be held as part of the International Conference on Biomedical Ontologies (ICBO2013) at Concordia University, Montreal, Quebec, on July 7th, 2013. The event is part of the Semantic Trilogy 2013 (above)
		+
		+	Topics of interest include, but are not limited to:
		+	*ontologies & terminologies for modeling computational biology
		+	*ontologies & terminologies for simulation (and result data) in computational biology/medicine/neuroscience
		+	*semantic web technologies for description, integration, query and discovery of models, simulations and result data
		+	*semantic web technologies for biological data and analysis
		+	*semantic annotations of bio-models
		+	*applications of ontologies in computational systems biology/medicine/neuroscience
		+	*semantic platforms for undertaking and visualizing simulation results
		+
		+	We welcome four types of submissions:
		+	* short papers, up to 4 pages.
		+	* long papers, up to 7 pages.
		+	* position papers, up to 1 page.
		+	* late breaking reports, up to 1 page.
		+
		+	See the ICBO website for further information on the submission types.
		+
		+	All submission are due on Monday, April 15 2013.
		+	Notification of acceptance: May 6th, 2013
		+
		+	==Botanical Society Meeting July 27-31st New Orleans==
		+
		+	[http://www.2013.botanyconference.org/ BSA 2013]
		+
		+	- MAG is planning to present the work she has been doing with the images and slides, will circulate the abstract
		+
		+	=Next meeting scheduled for Tuesday, May 28th, 2013 at 10am Pacific/1pm Eastern=