POC Conf. Call 5-17-11 - Revision history

Cooperl: /* OBO Foundry Acceptance: */

2011-07-18T21:09:17Z

OBO Foundry Acceptance:

2011-07-18T21:09:04Z

OBO Foundry Acceptance:

2011-06-03T13:16:28Z

Items arising from previous meetings:

2011-05-18T16:47:59Z

gametophore bud initial (PO:0030083)

2011-05-18T16:47:02Z

New apical cells

2011-05-18T16:46:43Z

Proposed solution

2011-05-18T16:45:58Z

Proposed solution

2011-05-18T16:41:17Z

leaflet midrib

2011-05-18T16:40:41Z

leaflet

2011-05-18T16:40:10Z

* Inserting the translations as synonyms into the obo file:

@@ Line 328: / Line 328: @@
 ==OBO Foundry Acceptance:==
-See summary page: [[http://wiki.plantontology.org:8080/index.php/OBO_Foundry]]
+See summary page: [[http://wiki.plantontology.org:8080/index.php/OBO_Foundry OBO Foundry]]
 Need to display a list of webpages that use the PO and encourage other groups to link to the PO and where the PO is integrated into their search engines.

@@ Line 327: / Line 327: @@
 =Other items:=
 ==OBO Foundry Acceptance:==
 Need to display a list of webpages that use the PO and encourage other groups to link to the PO and where the PO is integrated into their search engines.

← Older revision		Revision as of 13:16, 3 June 2011
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	''We decided the make it a policy to use the noun name when the term refers to another term in the ontology. In the other cases such as for descriptors "extrafloral", we will use the form of the word that is in common use and makes the most sense.''		''We decided the make it a policy to use the noun name when the term refers to another term in the ontology. In the other cases such as for descriptors "extrafloral", we will use the form of the word that is in common use and makes the most sense.''
−

	=Other items:=		=Other items:=

← Older revision		Revision as of 16:47, 18 May 2011
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	Add gametophore bud develops_from gametophore bud initial.		Add gametophore bud develops_from gametophore bud initial.
		+
		+	''This was accepted at the meeting, but afterwards, Stefan said it was not appropriate as child of side branch initial, should be sibling instead. See full comment on SF tracker.''

	=Details for the Upcoming Release:=		=Details for the Upcoming Release:=

@@ Line 246: / Line 246: @@
 '''rhizoid meristematic apical cell (PO:0030080):''' A gametophytic meristematic apical cell
 that is part of a rhizoid.
 ==[https://sourceforge.net/tracker/index.php?func=detail&aid=3293297&group_id=76834&atid=835555 gametophore bud initial (PO:0030083)]==

← Older revision		Revision as of 16:46, 18 May 2011
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	Comment: Term used for bryophytes. May have one or more layers. An amphithecium may give rise to an exothecium and other layer of a sporangium wall (jacket layer or layers). In true mosses, the amphithecium gives rise to the sporangium wall and the peristome. In hornworts and peat mosses, it gives rise to the sporangium wall and sporogenous tissue.		Comment: Term used for bryophytes. May have one or more layers. An amphithecium may give rise to an exothecium and other layer of a sporangium wall (jacket layer or layers). In true mosses, the amphithecium gives rise to the sporangium wall and the peristome. In hornworts and peat mosses, it gives rise to the sporangium wall and sporogenous tissue.
		+
		+	''accepted''

@@ Line 200: / Line 200: @@
 '''[https://sourceforge.net/tracker/index.php?func=detail&aid=3298004&group_id=76834&atid=835555 early sporangium endothecium]''' (PO:0030085): A portion of ground tissue that is the tissue internal to an amphithecium early in sporangium development.
 Comment: Term used for bryophytes. In liverworts an early sporangium endothecium produces sporogenous tissue. In Sphagnum, Andreaea, and hornworts, it produces columella and sporogenous tissue.
@@ Line 208: / Line 206: @@
 synonym: endothecium of early sporangium
@@ Line 217: / Line 217: @@
 synonym: endothecium of sporangium wall
@@ Line 223: / Line 225: @@
 Add comment: Develops from the outermost layer of an amphithecium in bryophytes.
-''all agreed and accepted the proposed definitions, names, comments''
+''accepted''
 ==[https://sourceforge.net/tracker/index.php?func=detail&aid=3234956&group_id=76834&atid=835555 New apical cells]==

← Older revision		Revision as of 16:41, 18 May 2011
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	As a related synonym of costa ('''not''' as a new term for a midrib in a non-vascular leaflet).		As a related synonym of costa ('''not''' as a new term for a midrib in a non-vascular leaflet).
		+
		+	''Will add non-vascular leaflet midrib as a related synonym to costa.''

	==[https://sourceforge.net/tracker/?func=detail&aid=3302899&group_id=76834&atid=835555 amphithecium]==		==[https://sourceforge.net/tracker/?func=detail&aid=3302899&group_id=76834&atid=835555 amphithecium]==

@@ Line 152: / Line 152: @@
 As a related synonym of non-vascular leaf (in the sense that it is a small leaf)
-''this refers to a 'little leaf', not part of a compound leaf -a related synonym, "small non-vascular leaflet"''
+''this refers to a 'little leaf', not part of a compound leaf. Will add a related synonym, " non-vascular leaflet".''
 ==[https://sourceforge.net/tracker/?func=detail&aid=3302892&group_id=76834&atid=835555 leaflet midrib]==

@@ Line 126: / Line 126: @@
 ''RW sent JE a line of syntax which should be appended with [POC:mag] for each of the spanish synonyms.
-''-JE created a folder on trunk for the translation files and converted the file to a tab-delimited file.  Posted the file from MAG/RW which has the terms in the ascii characters, should put the other one in as well.  Need to add the Japanese translation file to the folder.  MAG can work from the file with the ASCI characters.  Not a problem.  This file corresponds to the current dev version (except the 5 terms from today)''
+''-JE created a folder on trunk for the translation files and converted the file to a tab-delimited file.  Posted the file from MAG/RW which has the terms in the ascii characters, should put the other one in as well.  Need to add the Japanese translation file to the folder.  MAG can work from the file with the ASCI characters.  Not a problem.  This file corresponds to the current dev version (except the 6 terms from today)''
 ''JE is working on the script to insert the translated term names as synonyms- High priority for the release''