POC Conf. Call 5-10-11 - Revision history

Cooperl: /* Review for OBO Foundry Acceptance */

2011-07-18T21:09:47Z

Review for OBO Foundry Acceptance

Cooperl: /* Foreign language synonyms */

2011-05-12T16:00:58Z

Foreign language synonyms

Cooperl: /* Foreign language synonyms */

2011-05-11T21:18:19Z

Foreign language synonyms

Cooperl: /* Foreign language synonyms */

2011-05-11T21:18:06Z

Foreign language synonyms

Cooperl: /* Tech Issues: */

2011-05-11T21:12:10Z

Tech Issues:

Cooperl: /* Tech Issues: */

2011-05-11T21:06:44Z

Tech Issues:

Rwalls: /* Highlights and Major Accomplishments in this Release: */

2011-05-11T18:16:28Z

Highlights and Major Accomplishments in this Release:

Cooperl: /* Tech Issues: */

2011-05-11T16:53:58Z

Tech Issues:

Cooperl: /* Tech Issues: */

2011-05-11T16:52:42Z

Tech Issues:

Rwalls: /* Review of apical cell (PO:0030007) and its descendents */

2011-05-11T14:58:11Z

Review of apical cell (PO:0030007) and its descendents

← Older revision		Revision as of 21:09, 18 July 2011
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	==Review for OBO Foundry Acceptance==		==Review for OBO Foundry Acceptance==
		+
		+	See summary page: [[http://wiki.plantontology.org:8080/index.php/OBO_Foundry OBO Foundry]]

	BS brought up the topic of review for OBO Foundry acceptance at the [[POC_Conf._Call_4-19-11]]. He suggested that the PO can be submitted for OBO Foundry membership within the next few weeks.		BS brought up the topic of review for OBO Foundry acceptance at the [[POC_Conf._Call_4-19-11]]. He suggested that the PO can be submitted for OBO Foundry membership within the next few weeks.

@@ Line 292: / Line 292: @@
 ''We should try to get Spanish synonyms in this release, but not delay the release because of them.  Putting in the Japanese synonyms will take more work and testing.  Best to leave that for the next release" ''
- ''After the meeting PJ suggested that we go ahead and put in the Japanese translations and then remove them in our version for the browser.  That way YY can use them right away for  their users.  Alternatively, We might be better to send them a special version of the file containing them or we may have offer two versions ''
+''After the meeting PJ suggested that we go ahead and put in the Japanese translations and then remove them in our version for the browser.  That way YY can use them right away for  their users.  Alternatively, We might be better to send them a special version of the file containing them or we may have offer two versions ''
 ==Monocot and gymnosperm AToL meetings==

@@ Line 292: / Line 292: @@
 ''We should try to get Spanish synonyms in this release, but not delay the release because of them.  Putting in the Japanese synonyms will take more work and testing.  Best to leave that for the next release" ''
-  ''After the meeting PJ suggested that we go ahead and put in the Japanese translations and then remove them in our version for the browser.  That way YY can use them right away for their users.  Alternatively, We might be better to send them a special version of the file containing them or we may have offer two versions ''
+  ''After the meeting PJ suggested that we go ahead and put in the Japanese translations and then remove them in our version for the browser.  That way YY can use them right away for  their users.  Alternatively, We might be better to send them a special version of the file containing them or we may have offer two versions ''
 ==Monocot and gymnosperm AToL meetings==

← Older revision		Revision as of 21:18, 11 May 2011
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	''We should try to get Spanish synonyms in this release, but not delay the release because of them. Putting in the Japanese synonyms will take more work and testing. Best to leave that for the next release" ''		''We should try to get Spanish synonyms in this release, but not delay the release because of them. Putting in the Japanese synonyms will take more work and testing. Best to leave that for the next release" ''
		+
		+	''After the meeting PJ suggested that we go ahead and put in the Japanese translations and then remove them in our version for the browser. That way YY can use them right away for their users. Alternatively, We might be better to send them a special version of the file containing them or we may have offer two versions ''

	==Monocot and gymnosperm AToL meetings==		==Monocot and gymnosperm AToL meetings==

@@ Line 17: / Line 17: @@
 Also added to the [[POC Technical Issues Page]]
-*New images needed for browser
+==New images needed for browser==
 JE: I noticed in the server logs that errors are being created because we are missing images for participates_in and adjacent_to.  Can someone create these for me to add to the browser?
 ''We have an image for participates_in, need one for adjacent_to. Will send to JE.''
-* Problem on the dev browser- can't filter by the new 'plant anatomy' name
+==Problem on the dev browser- can't filter by the new 'plant anatomy' name==
 ''Looked at filtering problem on dev browser.  It does not seem to be related to differences in capitalization or word form, as these also exist on the live browser, with no problem. JE is looking into it. ''
-*Problems displaying AmiGO Browser in Internet Explorer:
+==Problems displaying AmiGO Browser in Internet Explorer==
 PJ sent a note out by email that some users are having problems displaying AmiGO Browser in Internet Explorer: IE views are not similar to the ones in Firefox.
@@ Line 34: / Line 34: @@
 - RW confirmed it: "The Amigo browser tree view does not display correctly in Internet Explorer on my PC either. All of the terms at one level of the tree are displayed on one line, instead of in a hierarchy. I'm sure I've griped about this before, but don't know if I have a written record. It works fine on Safari and Firefox on my Mac."
 =Items arising from previous meetings:=

← Older revision		Revision as of 21:06, 11 May 2011
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	=Tech Issues:=		=Tech Issues:=
		+
		+	Also added to the [[POC Technical Issues Page]]

	*New images needed for browser		*New images needed for browser

← Older revision		Revision as of 18:16, 11 May 2011
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	-Renamed Plant Structure Ontology to Plant Anatomy Ontology- note this is just the branch of the Plant Ontology, all terms still have the PO:xxxxxxx identifier		-Renamed Plant Structure Ontology to Plant Anatomy Ontology- note this is just the branch of the Plant Ontology, all terms still have the PO:xxxxxxx identifier

−	See note above ~~abut~~ filtering issue on 'plant anatomy'	+	See note above about filtering issue on 'plant anatomy'

← Older revision		Revision as of 16:52, 11 May 2011
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	''Looked at filtering problem on dev browser. It does not seem to be related to differences in capitalization or word form, as these also exist on the live browser, with no problem. JE is looking into it. ''		''Looked at filtering problem on dev browser. It does not seem to be related to differences in capitalization or word form, as these also exist on the live browser, with no problem. JE is looking into it. ''
		+
		+	*Problems displaying AmiGO Browser in Internet Explorer:
		+
		+	PJ sent a note out by email that some users are having problems displaying AmiGO Browser in Internet Explorer:
		+
		+	[https://sites.google.com/site/liveplantimagegroup/ontologies-and-identifier-structure/plant-ontology link]
		+
		+	see the comment "On my computer, this displays correctly in FireFox 3.6.13, but not Internet Explorer 8.0.6' on this page."
		+
		+	I confirm that IE views are not similar to the ones in Firefox.
		+
		+	RW confirmed it: "The Amigo browser tree view does not display correctly in Internet Explorer on my PC either. All of the terms at one level of the tree are displayed on one line, instead of in a hierarchy. I'm sure I've griped about this before, but don't know if I have a written record. It works fine on Safari and Firefox on my Mac."

	=Items arising from previous meetings:=		=Items arising from previous meetings:=

← Older revision		Revision as of 14:58, 11 May 2011
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	''Although the term apical meristem is used to include the portion of tissue at the tip of a fern root that includes the root apical cell, using part_of RAM could lead to confusion. For now, we will make root apical cell part_of root tip. If it becomes widely accepted that there are apical meristems in plants that grow from apical cells, we can change it later.		''Although the term apical meristem is used to include the portion of tissue at the tip of a fern root that includes the root apical cell, using part_of RAM could lead to confusion. For now, we will make root apical cell part_of root tip. If it becomes widely accepted that there are apical meristems in plants that grow from apical cells, we can change it later.
		+
		+	''RW: By the same reasoning, shoot axis apical cell should be part of shoot apex, not part of SAM.''