POC Conf. Call 5-03-11 - Revision history

Rwalls: /* stereome (PO:0030050) */

2011-05-05T12:36:23Z

stereome (PO:0030050)

Rwalls: /* leptome (PO:0030048) */

2011-05-05T12:35:54Z

leptome (PO:0030048)

Rwalls: /* hydrome (PO:0030047) */

2011-05-05T12:35:32Z

hydrome (PO:0030047)

Rwalls: /* paraphysis (PO:0030070) */

2011-05-05T12:08:31Z

paraphysis (PO:0030070)

Cooperl: /* Other Issues */

2011-05-05T01:17:37Z

Other Issues

Cooperl: /* Parts of sporangium */

2011-05-05T01:17:25Z

Parts of sporangium

Cooperl: /* Parts of sporangium */

2011-05-05T01:17:10Z

Parts of sporangium

Cooperl: /* Parts of sporangium */

2011-05-05T01:16:54Z

Parts of sporangium

Show changes

Cooperl: /* Other Issues */

2011-05-04T23:08:54Z

Other Issues

Cooperl: /* Review of apical cell (PO:0030007) and its descendents */

2011-05-04T23:08:18Z

Review of apical cell (PO:0030007) and its descendents

← Older revision		Revision as of 12:36, 5 May 2011
Line 193:		Line 193:

	''Stereome has the same issues as hydrome.''		''Stereome has the same issues as hydrome.''
−
−	~~''New proposed def.: A portion of plant tissue that has as parts only steroid cells.''~~

	''Add to comment: A stereome is composed of only steroid cells.''		''Add to comment: A stereome is composed of only steroid cells.''

← Older revision		Revision as of 12:35, 5 May 2011
Line 175:		Line 175:

	''Leptome has the same issues as hydrome.''		''Leptome has the same issues as hydrome.''
−
−	~~''New proposed def.: A portion of plant tissue that has as parts only leptoid cells.''~~

	''Add to comment: A leptome is composed of only leptoid cells.''		''Add to comment: A leptome is composed of only leptoid cells.''

← Older revision		Revision as of 12:35, 5 May 2011
Line 156:		Line 156:


−	''There was some discussion about exact wording of the definition. BS explained that to a logical reasoner, when you say that X has parts Ys, it does not follow that X has as parts all the parts of Y. So, for example, hydrome ~~has_part~~ hydroid cells ~~does not mean~~ that hydrome has_part hydroid cell nucleus.''	+	''There was some discussion about exact wording of the definition. BS explained that to a logical reasoner, when you say that X has parts only Ys, it does not follow that X has as parts all the parts of Y. So, for example, hydrome has as parts only hydroid cells excludes the possibility that hydrome has_part hydroid cell nucleus, which of course is wrong.''

−	~~''New proposed def.: A portion of plant tissue that has as parts only hyrdoid cells.''~~

	''Add to comment: A hydrome is composed of only hydroid cells.''		''Add to comment: A hydrome is composed of only hydroid cells.''

← Older revision		Revision as of 12:08, 5 May 2011
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−	''New proposed def: A slender multicellular trichome that grows between the gametangia.'''	+	''New proposed def: A slender multicellular trichome that grows between the gametangia.''

	''Comment: Usually multiseriate. Found in bryophytes and pteridophytes, especially in mosses.''		''Comment: Usually multiseriate. Found in bryophytes and pteridophytes, especially in mosses.''

−	~~''plural: paraphyses; particpates_in gametophytic phase''~~

@@ Line 249: / Line 249: @@
 '''*Review for OBO Foundry Acceptance'''
-''Postponed until [[POC_Conf._Call_5-06-11]]''
+''Postponed until [[POC_Conf._Call_5-10-11]]''
 =Upcoming meetings 2011:=

@@ Line 244: / Line 244: @@
 ==Parts of sporangium==
-''Postponed until [[POC_Conf._Call_5-10-11]]''
+''Postponed until [[POC_Conf._Call_5-06-11]]''
 =Other Issues=

← Older revision		Revision as of 23:08, 4 May 2011
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	''Postponed until [[POC_Conf._Call_5-06-11]]''		''Postponed until [[POC_Conf._Call_5-06-11]]''
−
−	~~BS brought up the topic of review for OBO Foundry acceptance at the [[POC_Conf._Call_4-19-11]]. He suggested that the PO can be submitted for OBO Foundry membership within the next weeks~~
−
−	~~List of Foundry Principles:[[http://www.obofoundry.org/wiki/index.php/Category:Accepted Accepted]] with a brief summary of each:~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_001_open FP 001 open]:
−	The ontology must be open and available to be used by all without any constraint other than (a) its origin must be acknowledged and (b) it is not to be altered and subsequently redistributed under the original name or with the same identifiers.
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_002_format FP 002 format]:
−	~~The ontology is in, or can be expressed in, a common shared syntax. This may be either the OBO syntax, extensions of this syntax, or OWL.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_003_URIs FP 003 URIs]:
−	The ontology possesses a unique identifier space within the OBO Foundry. The identifier uniquely and persistently identifies a definition, which itself unambiguous identifies some type of biological entity. The identifier is for the definition: it is NOT the name and it is NOT an identifier for the name.
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_004_versioning FP 004 versioning]:
−	~~The ontology provider has procedures for identifying distinct successive versions.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_005_delineated_content FP 005 delineated content]:
−	~~The ontology has a clearly specified and clearly delineated content. The ontology must be orthogonal to other ontologies already lodged within OBO.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_006_textual_definitions FP 006 textual definitions]:
−	~~The ontologies include textual definitions for all terms.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_007_relations FP 007 relations]:
−	~~The ontology uses relations which are unambiguously defined following the pattern of definitions laid down in the OBO Relation Ontology.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_008_documented FP 008 documented]:
−	~~The ontology is well documented.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_009_users FP 009 users]:
−	~~The ontology has a plurality of independent users.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_010_collaboration FP 010 collaboration]:
−	~~The ontology will be developed collaboratively with other OBO Foundry members.~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_011_locus_of_authority FP 011 locus of authority]:
−	~~single locus of authority, tracker (SOP), responsive help desk~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_012_naming_conventions FP 012 naming conventions]:
−	~~See [http://www.obofoundry.org/wiki/index.php/Naming naming conventions]~~
−
−	* [http://www.obofoundry.org/wiki/index.php/FP_016_maintenance FP 016 maintenance]
−	OBO is an open community and, by joining the initiative, the authors of an ontology commit to its maintenance in light of scientific advance and to working with other members to ensure the improvement of these principles over time

	=Upcoming meetings 2011:=		=Upcoming meetings 2011:=

@@ Line 18: / Line 18: @@
 ''Postponed until [[POC_Conf._Call_5-06-11]]''
-At the POC meeting on 4/28/11, we decided to name this term '''meristematic apical cell'''
+===New terms and definitions for apical cells===
-===New terms and definitions for apical cells===
+''Postponed until [[POC_Conf._Call_5-06-11]]''
 =New terms for Physcomitrella and related taxa (continued)=