POC Conf. Call 4-28-11 - Revision history

Rwalls: /* Other cell types, not requested by MO: */

2011-05-04T19:32:20Z

Other cell types, not requested by MO:

2011-05-04T18:17:23Z

Other cell types, not requested by MO:

2011-05-04T13:44:49Z

Sporangium

2011-05-04T12:42:39Z

Cardinal organ parts

2011-05-04T12:23:15Z

Cardinal organ parts

2011-05-04T11:33:08Z

antheridiophore and archegoniophore

2011-05-04T11:13:39Z

gametophytic perianth (PO:0030031)

2011-05-04T10:59:00Z

perigonial bract (PO:0030028)

2011-05-03T19:16:32Z

cauloid

2011-05-02T17:39:59Z

plant embryo (PO:0009009)

← Older revision		Revision as of 19:32, 4 May 2011
Line 739:		Line 739:
	''Accepted''		''Accepted''

−	''Note: At the [[POC_Conf._Call_5-03-11]], we decided to make a general class for all types of rhizoids, including those that arise from structures like the protonema that don't have an epidermis. Rhizoids that arise from protonema develop from a protonemal side branch initial. This class rhizoid intial (PO:0030068) should probably be renamed epidermal rhizoid initial.''	+	''Note: At the [[POC_Conf._Call_5-03-11]], we decided to make a general class for all types of rhizoids, including those that arise from structures like the protonema that don't have an epidermis. Rhizoids that arise from protonema develop from a protonemal side branch initial. This class rhizoid intial (PO:0030068) should probably be renamed epidermal rhizoid initial. See additional notes at [[POC_Conf._Call_5-06-11#rhizoids]]''

@@ Line 729: / Line 729: @@
 ===Other cell types, not requested by MO:===
-*'''[https://sourceforge.net/tracker/?func=detail&aid=3293302&group_id=76834&atid=835555 rhizoid initial]'''
+*'''[https://sourceforge.net/tracker/?func=detail&aid=3293302&group_id=76834&atid=835555 rhizoid initial (PO:0030068)]'''
 '''Proposed def.:''' An epidermal initial cell that gives rise to a rhizoid. [PMID: 12917289]
@@ Line 738: / Line 738: @@
 ''Accepted''

← Older revision		Revision as of 13:44, 4 May 2011
Line 536:		Line 536:

	We could continue to use the more general part_of relation for located_in, if we don't want to add a new relation.		We could continue to use the more general part_of relation for located_in, if we don't want to add a new relation.
		+
		+	''The above changes were accepted.''

	==Plant Cells==		==Plant Cells==

@@ Line 369: / Line 369: @@
 ''That publication mentions inner peristomal layer (IPL) and primary peristomal layer (PPL). Can investigate whether or not we should add those terms.''
-''Revised definition: A single or double circle of peristome teeth inside of a sporangium mouth.''
+''Revised definition: A single or double circle of peristome teeth inside a sporangium mouth.''
 ''Accepted''

@@ Line 329: / Line 329: @@
 Comment:  Term used in mosses and other bryophytes and some pteridophytes. The sporangium base is the sterile part of the sporangium below the theca. If swollen and distinct from the rest of the sporangium, it is called an apophysis or hypophysis. (ref: Bill and Nancy Malcolm (2006): Mosses and other Bryophytes, an illustrated glossary, second edition)
-part_of sporangium; Synonyms: sporangium neck, apophysis, hypophysis
+part_of sporangium; Synonyms: sporangium neck, apophysis, hypophysis (Crum)
 subsets for bryophytes, pteridophytes

← Older revision		Revision as of 11:33, 4 May 2011
Line 261:		Line 261:


−	''Add terms for antheridial head and archegonial head.''	+	''Add terms for antheridial head and archegonial head. (cardinal organ parts)''

@@ Line 213: / Line 213: @@
 ===[https://sourceforge.net/tracker/?func=detail&aid=3185171&group_id=76834&atid=835555 gametophytic perianth (PO:0030031)]===
-'''Proposed def.:'''  A collective phyllome structure that consists of two or more of the most distal perichaetal bracts on a gametophore axis and surround a capsule.
+'''Proposed def.:'''  A collective phyllome structure that consists of two or more of the most distal perichaetal bracts on a gametophore axis that surround a capsule.
 -has_part parachaetal bract, part_of gametophore, disjoint_from perianth (PO:0009058)

← Older revision		Revision as of 10:59, 4 May 2011
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	''Accepted''		''Accepted''
		+
		+	''In definition of bract (PO:0009055), "usually different from foliage leaves" should just say leaves, and go in comment.''

	===[https://sourceforge.net/tracker/?func=detail&aid=3234965&group_id=76834&atid=835555 foot]===		===[https://sourceforge.net/tracker/?func=detail&aid=3234965&group_id=76834&atid=835555 foot]===

@@ Line 137: / Line 137: @@
 ==Plant organs:==
-===[https://sourceforge.net/tracker/?func=detail&aid=3185162&group_id=76834&atid=835555 cauloid]===
+===[https://sourceforge.net/tracker/?func=detail&aid=3185162&group_id=76834&atid=835555 caulid/cauloid]===
 - This is the term used for the gametophore stem or axis.
@@ Line 155: / Line 155: @@
 '''gametophore stem (PO:0030022)''': A stem that is part of a gametophore.
-is_a stem, part_of gametophore
+is_a stem, part_of gametophore ''Add synonyms caulid stem and cauloid stem''
 '''gametophore branch (PO:0030021)''': A branch that is part of a gametophore.
-is_a branch, part_of gametophore
+is_a branch, part_of gametophore ''Add synonyms caulid branch and cauloid branch''

@@ Line 20: / Line 20: @@
 is_a plant embryo
 '''* cultured zygote-derived plant embryo''' (PO:0025304): def'n: A zygotic plant embryo that is grown or maintained in culture.
@@ Line 31: / Line 38: @@
 ''Terms and definitions were accepted''
 Renamed: