POC Conf. Call 3-13-12 - Revision history

Cooperl at 00:54, 24 March 2012

2012-03-24T00:54:10Z

2012-03-20T19:56:16Z

2012-03-20T19:50:50Z

2012-03-14T15:28:22Z

growth ring/layer (PO:0004514):

2012-03-14T14:13:28Z

icons

2012-03-14T14:13:04Z

Timeline:

2012-03-14T14:12:03Z

Glossary of PO terms

2012-03-14T14:11:27Z

Timeline:

2012-03-14T14:06:01Z

Update on linking to images from PlantSystematics.org

2012-03-14T14:04:14Z

Finishing up the wood types:

@@ Line 3: / Line 3: @@
 In attendance:
-POC members:''Laurel Cooper (OSU), Ramona Walls (NYBG), Justin Preece (OSU), Marie Alejandra Gandolfo (Cornell Pankaj Jaiswal (OSU), Dennis Stevenson (NYBG) ''
+POC members:''Laurel Cooper (OSU), Ramona Walls (NYBG), Justin Preece (OSU), Marie Alejandra Gandolfo (Cornell Pankaj Jaiswal (OSU), Dennis Stevenson (NYBG),  Justin Elser (OSU). ''
-Absent: ''Barry Smith (University at Buffalo, NY),  Justin Elser (OSU), Chris Mungall (Lawrence Berkeley National Lab)'' ??
+Absent: ''Barry Smith (University at Buffalo, NY), Chris Mungall (Lawrence Berkeley National Lab)'' ??

← Older revision		Revision as of 19:56, 20 March 2012
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	POC members:''Laurel Cooper (OSU), Ramona Walls (NYBG), Justin Preece (OSU), Marie Alejandra Gandolfo (Cornell Pankaj Jaiswal (OSU), Dennis Stevenson (NYBG) ''		POC members:''Laurel Cooper (OSU), Ramona Walls (NYBG), Justin Preece (OSU), Marie Alejandra Gandolfo (Cornell Pankaj Jaiswal (OSU), Dennis Stevenson (NYBG) ''

−	Absent: ''Barry Smith (University at Buffalo, NY), Justin Elser (OSU), Chris Mungall (Lawrence Berkeley National Lab)''	+	Absent: ''Barry Smith (University at Buffalo, NY), Justin Elser (OSU), Chris Mungall (Lawrence Berkeley National Lab)'' ??

← Older revision		Revision as of 19:50, 20 March 2012
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	In attendance:		In attendance:

−	POC members:	+	POC members:''Laurel Cooper (OSU), Ramona Walls (NYBG), Justin Preece (OSU), Marie Alejandra Gandolfo (Cornell Pankaj Jaiswal (OSU), Dennis Stevenson (NYBG) ''
		+
		+	Absent: ''Barry Smith (University at Buffalo, NY), Justin Elser (OSU), Chris Mungall (Lawrence Berkeley National Lab)''

−	~~Absent:~~

@@ Line 126: / Line 126: @@
 ''Will keep growth ring as a primary name, because it is used more commonly. Add growth layer as synonym.''
-''New comment: Appears as a ring in a transverse section of plant axis. May be an annual ring (one growth ring per year) or a false annual ring (more or less than one growth per year).''
+''New comment: Appears as a ring in a transverse section of plant axis. May be an annual ring (one growth ring per year) or a false annual ring (more or less than one growth ring per year).''
 ===[https://sourceforge.net/tracker/?func=detail&aid=3502785&group_id=76834&atid=835555 growth ring boundary] (PO:0004517):===

@@ Line 181: / Line 181: @@
 ==icons==
-LC should send email to PJ about which icons are needed, what letters he should use.
+''LC should send email to PJ about which icons are needed, what letters he should use.''
 ==Goals and Priorities:==

← Older revision		Revision as of 14:13, 14 March 2012
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	''We probably want to have this release out before we submit, so reviewers and editors can look at the web site. If we get feedback from reviewers on manuscripts, we can work those into the next release in two months.''		''We probably want to have this release out before we submit, so reviewers and editors can look at the web site. If we get feedback from reviewers on manuscripts, we can work those into the next release in two months.''
		+
		+	''We can get this week's changes, plus the wood development stages and the coleoptile emergence terms in the file by next week, and review them at next week's meeting.''

	==icons==		==icons==

← Older revision		Revision as of 14:12, 14 March 2012
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	''what is the status of this?''		''what is the status of this?''
		+
		+	''This is ready to go, and can go out with the next release.''

	===Other Items===		===Other Items===

← Older revision		Revision as of 14:11, 14 March 2012
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	*Target date for release: ''Before March 30th''		*Target date for release: ''Before March 30th''
		+
		+
		+	''We should aim to have to release out by the end of this month, so we can then focus on the paper to have manuscripts ready by April 15th.''
		+
		+	''We probably want to have this release out before we submit, so reviewers and editors can look at the web site. If we get feedback from reviewers on manuscripts, we can work those into the next release in two months.''

	==icons==		==icons==

@@ Line 160: / Line 160: @@
 What is the status of the images and the annotation software?
-It would be good to have a set of test or sample images in the Ontology for the upcoming release.  This wil help move it forward.
+''PJ will talk to MAG separately about the image annotation software.  If necessary, we can set up conference call with KN re. informatics issues.''
 =Next PO Release:=

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 comment: Heartwood has ceased to function in storage and conduction, and the reserve materials have been removed or converted into heartwood substances. It is generally darker colored than sapwood (PO:0004513) and is found in the center of a plant axis (PO:0025004), interior to the sapwood. Heartwood forms at the end of a cell death stage of secondary xylem (PO:xxxx).
-''OK''
+''OK. Say shoot axis or root.''
 ===[https://sourceforge.net/tracker/?func=detail&aid=3502764&group_id=76834&atid=835555 early wood] (PO:0004515):===
@@ Line 86: / Line 86: @@
 synonyms: earlywood, spring wood
 ===[https://sourceforge.net/tracker/?func=detail&aid=3502764&group_id=76834&atid=835555 late wood] (PO:0004516):===
@@ Line 109: / Line 123: @@
 comment: Forms a ring in a plant axis when viewed in transverse section. May be an annual ring or a false annual ring.
 ===[https://sourceforge.net/tracker/?func=detail&aid=3502785&group_id=76834&atid=835555 growth ring boundary] (PO:0004517):===
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 '''Alternative def.:''' A portion of secondary xylem that includes the outermost (last formed) late wood (PO:0004516) of one growth ring and the innermost (earliest formed) early wood (PO:0004515) of the next growth ring (PO:0004514).
 =Open SourceForge Tracker for [http://sourceforge.net/tracker/?func=detail&aid=3324056&group_id=76834&atid=835555 coleoptile emergence]:=