POC Conf. Call 2-01-11 - Revision history

Cooperl: /* Next meeting scheduled for Tues, Feb. 8th, 2010 at 10am PST */

2011-02-09T23:49:10Z

Next meeting scheduled for Tues, Feb. 8th, 2010 at 10am PST

2011-02-02T23:33:49Z

NYBG outreach activities

2011-02-02T23:33:36Z

NYBG outreach activities

2011-02-02T23:32:47Z

Restructuring descendants of leaf (PO:0025034)

2011-02-02T23:32:39Z

Physcomitrella terms:

2011-02-02T23:16:06Z

ovary septum vs. carpel septum

2011-02-02T22:44:00Z

dispersed meristematic cell

2011-02-02T17:43:56Z

Publications

2011-02-02T17:43:44Z

Publications

2011-02-02T13:37:57Z

stomatal meristemoid cell and meristemoid/initial cell

← Older revision		Revision as of 23:49, 9 February 2011
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	We received permission to use the 6th time slot for a discussion session. PJ will lead the discussion.		We received permission to use the 6th time slot for a discussion session. PJ will lead the discussion.

−	==Next meeting scheduled for Tues, Feb. 8th, ~~2010~~ at 10am PST==	+	==Next meeting scheduled for Tues, Feb. 8th, 2011 at 10am PST==

← Older revision		Revision as of 23:33, 2 February 2011
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−	-''Ran out of time to talk about ~~these~~, tabled for next meeting. PJ was not present. Ramona will follow up with Dennis at NYBG.''	+	-''Ran out of time to talk about this, tabled for next meeting. PJ was not present. Ramona will follow up with Dennis at NYBG.''

	=Upcoming meetings 2011:=		=Upcoming meetings 2011:=

← Older revision		Revision as of 23:33, 2 February 2011
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	-DWS will provide the tree diagrams and text and images of the sequenced genome plant examples.		-DWS will provide the tree diagrams and text and images of the sequenced genome plant examples.
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		+	-''Ran out of time to talk about these, tabled for next meeting. PJ was not present. Ramona will follow up with Dennis at NYBG.''

	=Upcoming meetings 2011:=		=Upcoming meetings 2011:=

← Older revision		Revision as of 23:32, 2 February 2011
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	-See [[descendants of leaf]] for summary.		-See [[descendants of leaf]] for summary.
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		+	''Ran out of time to talk about these, tabled for next meeting.''

	=NYBG outreach activities=		=NYBG outreach activities=

← Older revision		Revision as of 23:32, 2 February 2011
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	Do we want to give Physco terms their own number space? Maybe a subset of the NYBG number space.		Do we want to give Physco terms their own number space? Maybe a subset of the NYBG number space.
		+
		+	''Ran out of time to talk about these, tabled for next meeting.''

	==Restructuring descendants of leaf (PO:0025034)==		==Restructuring descendants of leaf (PO:0025034)==

@@ Line 107: / Line 107: @@
 There was a request for a new term 'ovary septum.' but after a long discussion on SF, the conclusion seems to be that ovary septum should be a synonym of carpel septum.
-Current definition of '''carpel septum''': A thin partition or membrane that divides multilocular ovary. Often found in species with syncarpous (multiple carpels fused) pistil. [source: GR:cwt, GR:pj]
+Current definition of '''carpel septum (PO:0005009)''': A thin partition or membrane that divides multilocular ovary. Often found in species with syncarpous (multiple carpels fused) pistil. [source: GR:cwt, GR:pj]
 Suggest placing the second sentence in a comment and removing the word often.
@@ Line 114: / Line 114: @@
-Current def'n: '''septum''': A thin partition or membrane that divides a cavity or a mass of tissue, e.g., in anther, ovary or fruit. [source: APWeb:Glossary], is_a portion of plant tissue.
+Current def'n: '''septum (PO:0000030)''': A thin partition or membrane that divides a cavity or a mass of tissue, e.g., in anther, ovary or fruit. [source: APWeb:Glossary], is_a portion of plant tissue.
 Suggest that septum should be a cardinal organ part, rather than a portion of plant tissue.

@@ Line 94: / Line 94: @@
 -'''procambial cell:''' A meristematic cell that is part of a portion of procambium. part_of procambium
--'''leaf procambrium:''' A portion of procambrium tissue that is part of a leaf. part_of leaf
+-'''leaf procambium:''' A portion of procambium tissue that is part of a leaf. part_of leaf
--'''leaf procambial cell:''' A procambial cell that is part of a leaf procambium. part_of leaf procabium syn: DMC, dispersed meristematic cell
+-'''leaf procambial cell:''' A procambial cell that is part of a leaf procambium. part_of leaf procambium syn: DMC, dispersed meristematic cell
 ''These new terms and definitions were accepted as is. Root procambium and shoot procambium already exist. Will add terms for shoot axis procambium and change existing definitions to genus-differentia form.''
 ===[https://sourceforge.net/tracker/?func=detail&aid=2782316&group_id=76834&atid=835555 ovary septum vs. carpel septum]===

← Older revision		Revision as of 17:43, 2 February 2011
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	* Paper for ICBO meeting- suggestion from BS, [http://icbo.buffalo.edu/cfp2011.html ICBO call for papers], deadline is March 1st		* Paper for ICBO meeting- suggestion from BS, [http://icbo.buffalo.edu/cfp2011.html ICBO call for papers], deadline is March 1st
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−

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 =Publications=
-- An abstract/proposal was submitted to Trends in Plant Science on Dec 31st, 2010. Unfortunately, it was declined.
+- An abstract/proposal was submitted to Trends in Plant Science on Dec 31st, 2010. Unfortunately, it was declined. The goal is still to put together a short write up for rapid publication and then a longer, more comprehensive one for later this year.
--LC has been looking at some other alternatives: [[PO_Paper_Winter_2011]]
+Possible target journals:
-Possible target journals:
+-See this page for more details of the different journals:[[PO_Paper_Winter_2011]]
 *[http://bib.oxfordjournals.org/ Briefings in Bioinformatics]: This one seems particularly relevant for a short article informing people about the PO

@@ Line 202: / Line 202: @@
 ''Proposed def.: A meristematic cell that by division gives rise to two cells, one of which remains meristematic, while the other is added to the plant body.''
-''Comment: Initial cells are often  part of a portion of tissue that is composed mostly of somewhat older, differentiating cells. The division of an initial cell is often uneven, with the smaller daughter cell remaining meristematic.''
+''Comment: Initial cells are  part of a portion of tissue that is composed mostly of somewhat older, differentiating cells. The division of an initial cell is often uneven, with the smaller daughter cell remaining meristematic.''
 ''BS suggested that terms like "epidermal initial" should have exact synonyms with the word cell in the name (e.g., epidermal initial cell).''