POC Conf. Call 11-17-10 - Revision history

Cooperl: /* Trichomes (Approval of changes from 11-5, 11-6, and 11-10) */

2010-11-19T18:26:13Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T18:20:10Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T18:16:38Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T18:14:18Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T18:11:26Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T18:06:38Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T17:43:33Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T17:41:46Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T17:36:47Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

2010-11-19T17:32:56Z

Trichomes (Approval of changes from 11-5, 11-6, and 11-10)

← Older revision		Revision as of 18:26, 19 November 2010
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	''Note: make seed trichome primary name for PO:0004511, seed hair as exact synonym; add pubescence as related synonym of seed trichome.''		''Note: make seed trichome primary name for PO:0004511, seed hair as exact synonym; add pubescence as related synonym of seed trichome.''
		+
		+	''The more specific sub-terms can be post-compositionally created or we can add them as needed by our users''

	==Related terms without is a parents:==		==Related terms without is a parents:==

← Older revision		Revision as of 18:20, 19 November 2010
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	'''Root hair''' (PO:0000256) currently is_a epidermal cell. Should it be is_a trichome or is_a trichome cell?		'''Root hair''' (PO:0000256) currently is_a epidermal cell. Should it be is_a trichome or is_a trichome cell?

−	''No. Should be is_a root epidermal cell. (~~make~~ new terms root epidermal cell and shoot epidermal cell).''	+	''No. Should be is_a root epidermal cell. (made new terms root epidermal cell (PO:0025164) and shoot epidermal cell (PO:0025165)).''

← Older revision		Revision as of 18:16, 19 November 2010
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−	'''Root hair''' (PO:0000256) currently is_a epidermal cell. ~~Shoud~~ it be is_a trichome or is_a trichome cell?	+	'''Root hair''' (PO:0000256) currently is_a epidermal cell. Should it be is_a trichome or is_a trichome cell?

	''No. Should be is_a root epidermal cell. (make new terms root epidermal cell and shoot epidermal cell).''		''No. Should be is_a root epidermal cell. (make new terms root epidermal cell and shoot epidermal cell).''

@@ Line 76: / Line 76: @@
 ''Glandular trichome (PO:0004509): new def'n: A  trichome that secretes or sequesters a portion of plant substance.
-add synonym: secretory trichome (narrow)
+''added synonym: secretory trichome (narrow)''
 '''Non-secretory trichome''' (PO:0004510) should be made obsolete, as it is synonymous with unicellular or multicellular trichome. Make it a synonym of trichome.
-''Merge with trichome, will make non-secretory trichome a synonym of trichome (PO:0000282), add synonyms 'unicellular non-secretory trichome' and 'multicellular non-secretory trichome for trichome cell and multicellular trichome.''
+''Merge with trichome, made non-secretory trichome a synonym of trichome (PO:0000282), added narrow synonyms 'unicellular non-secretory trichome' and 'multicellular non-secretory trichome for trichome cell and multicellular trichome.''

@@ Line 74: / Line 74: @@
 ''Change primary name to glandular trichome, secretory trichome is synonym.''
-''new def'n: A  trichome that secretes or sequesters a portion of plant substance.
+''Glandular trichome (PO:0004509): new def'n: A  trichome that secretes or sequesters a portion of plant substance.
 '''Non-secretory trichome''' (PO:0004510) should be made obsolete, as it is synonymous with unicellular or multicellular trichome. Make it a synonym of trichome.

← Older revision		Revision as of 18:06, 19 November 2010
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	''Change primary name to glandular trichome, secretory trichome is synonym.''		''Change primary name to glandular trichome, secretory trichome is synonym.''
		+
		+	''new def'n: A trichome that secretes or sequesters a portion of plant substance.

@@ Line 56: / Line 56: @@
 Comment: For branches of a unicellular trichome, see unicellular trichome branch (GO:xxxxxxx).
-''Above changes were approved. RW: Added comment: 'consider multicellular trichome branch cell' to obsolote trichome branch.''
+''Above changes were approved. RW: Added comment: 'consider multicellular trichome branch cell' to obsolete trichome branch.''
@@ Line 65: / Line 65: @@
 -May need to tweak this definition slightly to allow trichomes to have part_of relation to epidermis. Maybe just add comment that epidermis can contain trichomes  and stomatal pores.''
-''yes. Add comment to epidermis. LC Added "Epidermis can also include trichomes and stomatal pores."''
+''yes. Add comment to epidermis. LC added comment: "Epidermis can also include trichomes and stomatal pores."''

@@ Line 61: / Line 61: @@
 NOTE: Is it okay to say trichome is part_of epidermis (most people think of it that way)?
 -Epidermis is currently defined as 'A portion of plant tissue composed of epidermal cells that develops from the protoderm and covers the surface of a plant structure.'
--May need to tweek this definition slightly to allow trichomes to have part_of relation to epidermis. Maybe just add comment that epidermis can contain trichomes  and stomatal pores.''
-''yes. Add comment to epidermis.''
+''yes. Add comment to epidermis. LC Added "Epidermis can also include trichomes and stomatal pores."''

← Older revision		Revision as of 17:36, 19 November 2010
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	Comment: For branches of a unicellular trichome, see unicellular trichome branch (GO:xxxxxxx).		Comment: For branches of a unicellular trichome, see unicellular trichome branch (GO:xxxxxxx).

−	''Above changes were approved. RW: ~~Add~~ consider multicellular trichome branch cell to obsolote trichome branch.''	+	''Above changes were approved. RW: Added comment: 'consider multicellular trichome branch cell' to obsolote trichome branch.''

← Older revision		Revision as of 17:32, 19 November 2010
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−	'''Question:''' Should multicellular trichome also have an is_a relation to trichome (PO:0000282)? This will lead to multiple parentage. A unicellular trichome is also a trichome, but we can't put an is_a relation between trichome cell and trichome, because not all trichome cells are trichomes, but we could put part_of relation. That way all annotations would group under trichome. Have an xp relation or put in comment?	+	'''Question:''' Should multicellular trichome (PO:newterm) also have an is_a relation to trichome (PO:0000282)? This will lead to multiple parentage.

−	''Will add is_a relation for multicellular trichome, part_of relation for trichome cell.''	+	A unicellular trichome is also a trichome, but we can't put an is_a relation between trichome cell and trichome, because not all trichome cells are trichomes, but we could put part_of relation. That way all annotations would group under trichome. Have an xp relation or put in comment?
		+
		+	''Will add is_a relation for multicellular trichome, part_of relation for trichome cell. We decided that in this case the dual is_a parentage was biologically necessary.''