POC Conf. Call 1-25-11 - Revision history

Cooperl: /* High priority items: */

2011-01-27T00:10:33Z

High priority items:

Cooperl: /* High priority items: */

2011-01-27T00:10:13Z

High priority items:

Cooperl: /* High priority items: */

2011-01-27T00:08:55Z

High priority items:

Cooperl: /* Adding foreign language synonyms to the PO */

2011-01-27T00:06:57Z

Adding foreign language synonyms to the PO

Rwalls: /* Defining Goals and Priorities for the next round of revisions: */

2011-01-26T15:03:23Z

Defining Goals and Priorities for the next round of revisions:

Rwalls: /* High priority items: */

2011-01-26T14:58:55Z

High priority items:

Cooperl: /* Upcoming meetings 2011: */

2011-01-26T02:14:08Z

Upcoming meetings 2011:

Cooperl: /* NYBG outreach activities */

2011-01-26T02:11:40Z

NYBG outreach activities

Cooperl: /* High priority items: */

2011-01-26T02:10:46Z

High priority items:

Cooperl: /* High priority items: */

2011-01-26T02:09:46Z

High priority items:

← Older revision		Revision as of 00:10, 27 January 2011
Line 172:		Line 172:

	-many of the part_of children of vascular leaf can also be part of non-vascular leaf. This needs to be done '''before''' we can add terms for bryophytes.		-many of the part_of children of vascular leaf can also be part of non-vascular leaf. This needs to be done '''before''' we can add terms for bryophytes.
		+
		+

	'''5. Reproductive structures across plants: RW and DWS (and MAG?) could work together to add the terms using the NYBG numberspace.'''		'''5. Reproductive structures across plants: RW and DWS (and MAG?) could work together to add the terms using the NYBG numberspace.'''

@@ Line 169: / Line 169: @@
-'''4.  Reproductive structures across plants: RW and DWS (and MAG?) could work together to add the terms using the NYBG numberspace.'''
+-many of the part_of children of vascular leaf can also be part of non-vascular leaf. This needs to be done '''before''' we can add terms for bryophytes.
 - terms used by model systems (Physcomitrella, Selaginella, Loblolly pine, poplar etc.), and terms are needed for the EST library from the Genomics of Seed Plants project.
@@ Line 178: / Line 181: @@
-'''5. Plant Growth and Development Stage Ontology restructuring'''
+'''6. Plant Growth and Development Stage Ontology restructuring'''
 A. overall structure:
@@ Line 188: / Line 191: @@
 As we work on a new overall structure, need to be sure it provides a framework for non-angiosperm terms

@@ Line 178: / Line 178: @@
-'''5. Plant Growth and development Stage Ontology restructuring'''
+'''5. Plant Growth and Development Stage Ontology restructuring'''
 A. overall structure:
@@ Line 199: / Line 199: @@
 ''Should start with the terms needed by the Physco group, plus terms for reproductive structures (see #4 above)''
 ====Medium Priority====

← Older revision		Revision as of 00:06, 27 January 2011
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	''BS said that as far as he knows, no other ontologies are dealing with foreign languages, except some Latin terms in the FMA. Ramona will look in to whether or not OboEdit has a way of specifying that synonyms are a foreign language.''		''BS said that as far as he knows, no other ontologies are dealing with foreign languages, except some Latin terms in the FMA. Ramona will look in to whether or not OboEdit has a way of specifying that synonyms are a foreign language.''
		+
		+	''Note from LC after the meeting: Maybe we could add a Translator widget to the browser? Google translator is one I have seen. As Google chrome is supposed to translate web pages automatically''.

	=Priorities for the Next Round of Revisions=		=Priorities for the Next Round of Revisions=

@@ Line 187: / Line 187: @@
-'''6. New terms for non-angiosperm structures'''
+'''6. Restructuring descendants of leaf (PO:0025034)'''
 - Ramona has a long list of new terms to add, but we need to choose an area for focus
 ''Should start with the terms needed by the Physco group, plus terms for reproductive structures (see #4 above)''
 ====Medium Priority====
 * '''Adding links to images through PlantSystematics.org'''

← Older revision		Revision as of 14:58, 26 January 2011
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	- Ramona has a long list of new terms to add, but we need to choose an area for focus		- Ramona has a long list of new terms to add, but we need to choose an area for focus
		+
		+	''Should start with the terms needed by the Physco group, plus terms for reproductive structures (see #4 above)''

	====Medium Priority====		====Medium Priority====

@@ Line 259: / Line 259: @@
 -Possible case study: description of inflorescence types.
-Second International Conference on Biomedical Ontology
+'''* ICBO 2011  Second International Conference on Biomedical Ontology'''
 July 26-30,  2011
 Buffalo, New York
@@ Line 268: / Line 266: @@
 URL: icbo.buffalo.edu
 The deadline for workshop and tutorial proposals for the ICBO conference is February 1, 2011

@@ Line 227: / Line 227: @@
 =NYBG outreach activities=
-Jan Stevenson from NYBG took part in discussion at NYBG on 11-6-2010. She is available to help with preparing text for a public audience, or producing AV materials.
+* Jan Stevenson from NYBG took part in discussion at NYBG on 11-6-2010. She is available to help with preparing text for a public audience, or producing AV materials.
-An online audio-video exhibit will cost about $6000. A  double display case with audio-video in the NYBG gallery will cost at least $12000.
+An online audio-video exhibit will cost about $6000. A  double display case with audio-video in the NYBG gallery will cost at least $12,000.
 -Possibly use flowering time examples from rice and brassicas
-Look at mirroring NYBG AV material from the Plants and Fungi Exhibit on the POC web site.  DWS will confirm the copyright issues etc.
+*Look at mirroring NYBG AV material from the Plants and Fungi Exhibit on the POC web site.  DWS will confirm the copyright issues etc.
-Create modified version of the tree of life from NYBG exhibit for online exhibit. Can add different images to tips to tell different stories, such as different types of fruits or flowers in angiosperms.
+* Create modified version of the tree of life from NYBG exhibit for online exhibit. Can add different images to tips to tell different stories, such as different types of fruits or flowers in angiosperms.
 -DWS will provide the tree diagrams and text and images of the sequenced genome plant examples.
-''Post-posed for a future meeting, since DWS and PJ were not present. Ramona will follow up with Dennis at NYBG.''
+''Post-poned for a future meeting, since DWS and PJ were not present. Ramona will follow up with Dennis at NYBG.''
 =Upcoming meetings 2011:=

@@ Line 144: / Line 144: @@
 ''This is also a requirement for OBO Foundry acceptance (see discussion below).''
-* '''Compliance with OBO Foundry guidelines'''
 - All but 3 terms now have is_a parents. The last three will be dealt with when we restructure the PGDSO
@@ Line 152: / Line 153: @@
 -need to double check that all terms have text definitions
-'''2. User requests need to be cleaned up and used to fill-in PSO that we have created.'''
 - Deal with and complete the list of user requests on SourceForge see: [[POC_Conf._Call_2-01-11]].
@@ Line 165: / Line 168: @@
-'''3.  Reproductive structures across plants: RW and DWS (and MAG?) could work together to add the terms using the NYBG numberspace.'''
+'''4.  Reproductive structures across plants: RW and DWS (and MAG?) could work together to add the terms using the NYBG numberspace.'''
 - terms used by model systems (Physcomitrella, Selaginella, Loblolly pine, poplar etc.), and terms are needed for the EST library from the Genomics of Seed Plants project.
@@ Line 173: / Line 176: @@
-'''4. Plant Growth and development Stage Ontology restructuring'''
+'''5. Plant Growth and development Stage Ontology restructuring'''
 A. overall structure:
@@ Line 184: / Line 187: @@
-'''5. New terms for non-angiosperm structures'''
+'''6. New terms for non-angiosperm structures'''
 - Ramona has a long list of new terms to add, but we need to choose an area for focus