POC Conf. Call 1-11-11 - Revision history

Rwalls: /* Tasks set out in Grant Proposal */

2011-01-21T13:59:00Z

Tasks set out in Grant Proposal

Cooperl at 22:26, 12 January 2011

2011-01-12T22:26:15Z

Cooperl: /* Upcoming meetings 2011: */

2011-01-12T21:46:49Z

Upcoming meetings 2011:

Cooperl: /* Upcoming meetings 2011: */

2011-01-12T21:39:28Z

Upcoming meetings 2011:

Rwalls: /* Priorities for the Next Round of Revisions */

2011-01-11T23:05:00Z

Priorities for the Next Round of Revisions

Cooperl: /* TIPS proposal */

2011-01-11T20:05:58Z

TIPS proposal

Cooperl: /* Priorities for the Next Round of Revisions */

2011-01-11T20:05:08Z

Priorities for the Next Round of Revisions

Cooperl: /* Timeline and Plan for Upcoming Release: */

2011-01-11T19:59:58Z

Timeline and Plan for Upcoming Release:

Cooperl: /* Timeline and Plan for Upcoming Release: */

2011-01-11T19:57:27Z

Timeline and Plan for Upcoming Release:

Cooperl: /* Timeline and Plan for Upcoming Release: */

2011-01-11T19:50:29Z

Timeline and Plan for Upcoming Release:

@@ Line 185: / Line 185: @@
 Year-2 Cross products with Gene Ontology, Plant Trait Ontology
-Jaiswal, Gandolfo and Stevenson; Project Description; 12
 Year-3 Cross products with USDA-GRIN database and CGIAR-Generation Challenge Program

@@ Line 3: / Line 3: @@
 In attendance:
-POC members:
+POC members:  Laurel Cooper (OSU), Ramona Walls (NYBG), Pankaj Jaiswal (OSU),  Justin Preece (OSU), Justin Elser (OSU), Maire Alejandra Gandolfo; (Cornell University),Barry Smith (University at Buffalo, NY).
-Absent:
+Absent: Dennis Stevenson (NYBG),Chris Mungall (Lawrence Berkeley National Lab)
-Collaborators:
+Collaborators: None
-Acceptance of the minutes from the [[POC Conf. Call 1-4-11]]?
+Acceptance of the minutes from the [[POC Conf. Call 1-4-11]]?  ''There were no additions, deletions or changes to the minutes of the last meeting.''

@@ Line 238: / Line 238: @@
 *'''[[PAG_2011_Collaborators_Workshop]]''' and meeting with collaborators
-Sunday Late Morning:
+Sunday Late Morning: Hampton Room
 Time: 10:30-1:00 pm (to include lunch, will wrap up in time to get to 1:30 sessions)

@@ Line 226: / Line 226: @@
 * '''[http://intl-pag.org/19/19-demos.html Computer Demonstration]:'''  Ramona will present.
-Saturday - Early Afternoon, January 15, 2011 -- 1:30 pm - 3:00 pm (third in series of seven)
+Saturday - Early Afternoon, January 15, 2011 -- 1:30 pm - 3:00 pm (2:10pm)
 Outline for [[PAG2011 Computer Demo]]

← Older revision		Revision as of 23:05, 11 January 2011
Line 81:		Line 81:

	*'''Target date for the next release?'''		*'''Target date for the next release?'''
−	Lets plan for early to mid march. (Before spring break!)	+	''Lets plan for early to mid march. (Before spring break!)''
		+
		+	''We will also plan on having the manuscript for Plant Physiology ready at about the same time. Need to do updates to PGDSO first so we can include them in the MS.''

@@ Line 211: / Line 211: @@
 An abstract/proposal was been submitted to Trends in Plant Science on Dec 31st, 2010.  It was sent out to everyone by email.
 Any news??
 =Upcoming meetings 2011:=

@@ Line 81: / Line 81: @@
 *'''Target date for the next release?'''
@@ Line 87: / Line 88: @@
 From 10-6-10 meeting:
-* Deal with and complete the list of user requests on SourceForge (see [http://wiki.plantontology.org:8080/index.php/POC_Conf._Call_1-25-11]).
+* Deal with and complete the list of user requests on SourceForge (see [http://wiki.plantontology.org:8080/index.php/POC_Conf._Call_1-25-11]).  ''High priority''
 * Plant Growth and development Stage Ontology restructuring should be a focus -- to add terms from non-angiosperms
--In the fall LC, RW and BS worked on restructuring PGDSO to meet BFO standards. Have a proposal to show group. For next meeting- 1/25/11??
+-In the fall LC, RW and BS worked on restructuring PGDSO to meet BFO standards. Have a proposal to show group. For next meeting- 1/25/11??  ''High priority''
 -Once overall structure is decided upon, need to create a better framework for non-angiosperm terms
@@ Line 100: / Line 101: @@
 -From 10-6-10 minutes: Ramona will work on list. Should focus on reproductive structures, terms used by model systems such as Phsyco, Selaginella, Loblolly pine, etc., plus whatever terms are needed for the EST library from the Genomics of Seed Plants project.
 -Work with Physco group to add terms for mosses
@@ Line 108: / Line 111: @@
 Note: tepal is only term linked right now (no longer working?).  Should be linked to the PO ids - have PO ids embedded in the Plantsystematics.org database.
 * Laurel and Ramona will focus more on adding annotations-

@@ Line 63: / Line 63: @@
 Is it always the case the the entire cell is composed of the tube? If so, the terms are redundant.
-''Everyone felt that we should keep it as it is''
+''Everyone felt that we should keep it as it is.  Some of the annotations should go in both GO and PO.  We should find out from Chris about how they deal with the cross ontology cross products (???)''
 Minor fixes:

@@ Line 23: / Line 23: @@
 ''BS and MAG  pointed out a few typos on the summary page (still in progress), PJ suggested we should still offer the PSO and PGDSO files separately for users.  JE could create a script to parse out the two parts and post them on the svn''
 ''Download ontologies page needs to be updated- take off the links to the really old files?''
 '''* Annotations that need to be moved:'''