POC-SOYBase meetings- Minutes - Revision history

Cooperl at 18:16, 27 May 2010

2010-05-27T18:16:11Z

Cooperl at 18:15, 27 May 2010

2010-05-27T18:15:36Z

Cooperl: Replaced content with 'POC-SoyBase Webex Conference Call;May 27th, 2010 8:30am (PDT)'

2010-05-27T18:14:46Z

Replaced content with 'POC-SoyBase Webex Conference Call;May 27th, 2010 8:30am (PDT)'

Cooperl at 18:08, 27 May 2010

2010-05-27T18:08:51Z

Cooperl: Created page with 'POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)'

2010-05-27T18:08:10Z

Created page with 'POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)'

New page

[[POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)]]

← Older revision		Revision as of 18:16, 27 May 2010
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−	POC-SoyBase Webex Conference Call [[May 27th, 2010 8:30am (PDT)]]	+	*POC-SoyBase Webex Conference Call [[May 27th, 2010 8:30am (PDT)]]

← Older revision		Revision as of 18:15, 27 May 2010
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−	POC-SoyBase Webex Conference Call;[[May 27th, 2010 8:30am (PDT)]]	+	POC-SoyBase Webex Conference Call [[May 27th, 2010 8:30am (PDT)]]

← Older revision		Revision as of 18:14, 27 May 2010
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−	[[POC-SoyBase Webex Conference Call; ~~Date:~~ May 27th, 2010 8:30am (PDT)]]	+	POC-SoyBase Webex Conference Call;[[May 27th, 2010 8:30am (PDT)]]
−	~~POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)~~
−
−	~~In attendance:~~
−
−	~~== Discussion items: ==~~
−
−	~~'''1. Overview and introduction to the [http://soybase.org/ontology.php SoyBase Ontology]- Rex Nelson'''~~
−	*Rex has re-named and re-numbered the soybean ontology. The prefix was changed back to "SOY" and the growth and development and trait ontology terms' accession number was changed to come after the whole growth terms.
−
−	* We need to check that the accession numbers that the PO Whole Plant Growth Stage Ontology have for soybean synonyms '''are unchanged''' and they refer to the proper terms.
−
−
−	~~'''2. List of terms to be added to the Trait Ontology from Rex'''~~
−
−	~~-Submit to [https://sourceforge.net/tracker/?func=browse&group_id=76834&atid=835557 TO SourceForge term request tracker]?~~
−
−
−	~~'''3. Possibility of hosting the SoyBase Ontology on the PO SVN.'''~~
−
−	We upload and store ("commit") all the ontology files in the svn repository on our server, instead of maintaining on our standalone machines. Every time we make a change it gets deposited back to the repository, so it will track the changes we just did. The link to the SVN can be accessed over the web anonymously, in addition to the command line via ssh/svn client.
−
−	~~For example, take a look at: [http://palea.cgrb.oregonstate.edu/viewsvn/Poc/trunk/ontology/OBO_format/po_anatomy.obo PO SVN]~~
−
−	~~We can help by creating a SOY or SoyBase directory under the~~
−	~~http://palea.cgrb.oregonstate.edu/viewsvn/Poc/trunk/ontology/collaborators_ontology/ for which you will have the read and write access and you will be the maintainer of it.~~
−
−	~~==Other Items?==~~

← Older revision		Revision as of 18:08, 27 May 2010
Line 1:		Line 1:
	[[POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)]]		[[POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)]]
		+	POC-SoyBase Webex Conference Call; Date: May 27th, 2010 8:30am (PDT)
		+
		+	In attendance:
		+
		+	== Discussion items: ==
		+
		+	'''1. Overview and introduction to the [http://soybase.org/ontology.php SoyBase Ontology]- Rex Nelson'''
		+	*Rex has re-named and re-numbered the soybean ontology. The prefix was changed back to "SOY" and the growth and development and trait ontology terms' accession number was changed to come after the whole growth terms.
		+
		+	* We need to check that the accession numbers that the PO Whole Plant Growth Stage Ontology have for soybean synonyms '''are unchanged''' and they refer to the proper terms.
		+
		+
		+	'''2. List of terms to be added to the Trait Ontology from Rex'''
		+
		+	-Submit to [https://sourceforge.net/tracker/?func=browse&group_id=76834&atid=835557 TO SourceForge term request tracker]?
		+
		+
		+	'''3. Possibility of hosting the SoyBase Ontology on the PO SVN.'''
		+
		+	We upload and store ("commit") all the ontology files in the svn repository on our server, instead of maintaining on our standalone machines. Every time we make a change it gets deposited back to the repository, so it will track the changes we just did. The link to the SVN can be accessed over the web anonymously, in addition to the command line via ssh/svn client.
		+
		+	For example, take a look at: [http://palea.cgrb.oregonstate.edu/viewsvn/Poc/trunk/ontology/OBO_format/po_anatomy.obo PO SVN]
		+
		+	We can help by creating a SOY or SoyBase directory under the
		+	http://palea.cgrb.oregonstate.edu/viewsvn/Poc/trunk/ontology/collaborators_ontology/ for which you will have the read and write access and you will be the maintainer of it.
		+
		+	==Other Items?==