Oak Ridge National Lab-ORNL - Revision history

Cooperl at 11:35, 20 October 2012

2012-10-20T11:35:08Z

Cooperl at 11:32, 20 October 2012

2012-10-20T11:32:44Z

Cooperl at 11:31, 20 October 2012

2012-10-20T11:31:57Z

Cooperl at 11:24, 20 October 2012

2012-10-20T11:24:56Z

Cooperl at 11:24, 20 October 2012

2012-10-20T11:24:23Z

Cooperl: Created page with ''''ORNL hosts an instance of the NCBO Bioportal ontology repository''' On 07/09/2012 11:42 AM, Pouchard, Line Catherine wrote: Hello Justin: At ORNL we have an instance of th…'

2012-10-20T11:23:17Z

Created page with ''''ORNL hosts an instance of the NCBO Bioportal ontology repository''' On 07/09/2012 11:42 AM, Pouchard, Line Catherine wrote: Hello Justin: At ORNL we have an instance of th…'

New page

'''ORNL hosts an instance of the NCBO Bioportal ontology repository'''

On 07/09/2012 11:42 AM, Pouchard, Line Catherine wrote:

Hello Justin:

At ORNL we have an instance of the NCBO Bioportal ontology repository populated with ontologies for the Earth and Environmental Sciences to enable interdisciplinary research. I am populating it with various ontologies that maybe of interest to the DataONE, ESIP, ORNL DAAC and other communities. I would like to download the latest version of the PO ontology in owl to stick it in there.

Is it available for public release as an owl file somewhere?

The URL for the repository is: http://mercury-ncbo.ornl.gov/ontologies

If you go to the URL you can see that the PO version we have in there is quite old. I am updating the repository content in preparation for the ESIP meeting next week, where this will be shown.

If you remember, we met at Damian Gessler's SSWAP meeting last year in Santa Fe.

Thank you
Line

Line C. Pouchard
Scientific Data Group
Computer Science and Mathematics
DataONE Integration and Semantics WG
Oak Ridge National Laboratory
1 Bethel Valley Road
Oak Ridge, TN 37831-6367
865-574-6125
other mail: linepouchard@gmail.com<mailto:linepouchard@gmail.com>
http://www.csm.ornl.gov/~7lp

-----reply-----
From: Justin Elser [elserj@science.oregonstate.edu<mailto:elserj@science.oregonstate.edu>]
Sent: Monday, July 09, 2012 08:17 PM Eastern Standard Time
To: Pouchard, Line Catherine
Cc: Laurel Cooper
Subject: Re: PO ontology

The most current version of the ontology in OWL format is available from here:
http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/plant_ontology.owl

This version was just released last week (release #18). When we have a new release, the above link will still point at the current release.

Let me know if you need more info.

justin

@@ Line 3: / Line 3: @@
 The URL for the repository is: [http://mercury-ncbo.ornl.gov/ontologies ORNL Bioportal Mirror]
-Need to get the metadata updated there- compare to Bioportal- is it he same?
+Need to get the metadata updated there- compare to Bioportal- No- needs to be updated to match.
 =Communications=

@@ Line 3: / Line 3: @@
 The URL for the repository is: [http://mercury-ncbo.ornl.gov/ontologies ORNL Bioportal Mirror]
+Need to get the metadata updated there- compare to Bioportal- is it he same?
 =Communications=

← Older revision		Revision as of 11:31, 20 October 2012
Line 1:		Line 1:
	'''ORNL hosts an instance of the NCBO Bioportal ontology repository'''		'''ORNL hosts an instance of the NCBO Bioportal ontology repository'''

		+	The URL for the repository is: [http://mercury-ncbo.ornl.gov/ontologies ORNL Bioportal Mirror]

		+
		+
		+	=Communications=
	On 07/09/2012 11:42 AM, Pouchard, Line Catherine wrote:		On 07/09/2012 11:42 AM, Pouchard, Line Catherine wrote:

@@ Line 29: / Line 29: @@
 other mail: linepouchard@gmail.com<mailto:linepouchard@gmail.com>
 http://www.csm.ornl.gov/~7lp
 -----

@@ Line 30: / Line 30: @@
 http://www.csm.ornl.gov/~7lp
------reply-----
+-----
 From: Justin Elser [elserj@science.oregonstate.edu<mailto:elserj@science.oregonstate.edu>]
 Sent: Monday, July 09, 2012 08:17 PM Eastern Standard Time
@@ Line 38: / Line 40: @@
 The most current version of the ontology in OWL format is available from here:
-http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/plant_ontology.owl
+[http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/plant_ontology.owl plant_ontology.owl]
 This version was just released last week (release #18).  When we have a new release, the above link will still point at the current release.