AgBase - Revision history

Jaiswal at 16:18, 30 April 2012

2012-04-30T16:18:08Z

2011-12-19T19:26:34Z

Adding annotations for seed trichome terms to describe the development of cotton fibers

2011-12-19T19:25:49Z

Adding annotations for seed trichome terms to describe the development of cotton fibers

2011-12-19T19:19:30Z

Adding annotations for seed trichome terms to describe the development of cotton fibers

2011-12-19T19:18:08Z

Adding annotations for seed trichome terms to describe the development of cotton fibers

2011-12-15T20:11:45Z

DbxRefs for Annotations

2011-12-15T20:08:52Z

DbxRefs for Annotations

2011-12-15T20:08:15Z

DbxRefs for Annotations

2011-12-15T19:11:22Z

2011-10-25T16:49:13Z

Created page with '[http://www.agbase.msstate.edu/ AgBase]'

New page

[http://www.agbase.msstate.edu/ AgBase]

← Older revision		Revision as of 16:18, 30 April 2012
Line 59:		Line 59:

	url_example: http://www.agbase.msstate.edu/cgi-bin/getEntry.pl?db_pick=all&database=UniProtKB/TrEMBL&uid=Q8VWP8_GOSHI&gb_acc=Q8VWP8		url_example: http://www.agbase.msstate.edu/cgi-bin/getEntry.pl?db_pick=all&database=UniProtKB/TrEMBL&uid=Q8VWP8_GOSHI&gb_acc=Q8VWP8
		+
		+
		+	[[Category:Collaborations]]

@@ Line 13: / Line 13: @@
 *seed trichome elongation stage (PO:0025371) [38]
 *seed trichome initiation stage PO:0025371 [17]
-*PO:0025372
+*seed trichome secondary wall biosynthesis stage (PO:0025372) [4]

← Older revision		Revision as of 19:25, 19 December 2011
Line 10:		Line 10:


		+	*seed trichome development stage (PO:0025369)
		+	*seed trichome elongation stage (PO:0025371) [38]
		+	*seed trichome initiation stage PO:0025371 [17]
		+	*PO:0025372
		+
		+
		+	* embryo stage (PO:0007631)
		+	* endosperm development stages (PO:0007633)
	* anther developmental stages (PO:0001004)		* anther developmental stages (PO:0001004)
	* leaf development stages (PO:0001050)		* leaf development stages (PO:0001050)

← Older revision		Revision as of 19:19, 19 December 2011
Line 3:		Line 3:
	=Adding annotations for seed trichome terms to describe the development of cotton fibers=		=Adding annotations for seed trichome terms to describe the development of cotton fibers=

		+	* seed trichome (PO:0004511)
		+	* petal (PO:0009032)
		+	* root (PO:0009005)
		+	* anther (PO:0009066)
		+	* vascular leaf (PO:0009025)

← Older revision		Revision as of 19:18, 19 December 2011
Line 2:		Line 2:

	=Adding annotations for seed trichome terms to describe the development of cotton fibers=		=Adding annotations for seed trichome terms to describe the development of cotton fibers=
		+
		+
		+
		+	* anther developmental stages (PO:0001004)
		+	* leaf development stages (PO:0001050)
		+	* root development stages (PO:0007520)
		+	* petal differentiation and expansion stage (PO:0007611)

	=DbxRefs for Annotations=		=DbxRefs for Annotations=

@@ Line 32: / Line 32: @@
 object: Anything with a Uniprot Gene Name or GenBank ID or GO ID
-example_id: AgBase:Q6GVK7
+example_id: AgBase:Q8VWP8
 generic_url: http://agbase.msstate.edu/index.html

@@ Line 28: / Line 28: @@
 abbreviation: AgBase
-database: Maize Genetics and Genomics Database
+database: AgBase
-object: Anything with a MaizeGDB Object ID Number or Gene Model Name
+object: Anything with a Uniprot Gene Name or GenBank ID
-example_id: MaizeGDB:881225
+example_id: AgBase:Q6GVK7
-generic_url: http://www.maizegdb.org/
+generic_url: http://agbase.msstate.edu/index.html
-url_syntax: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=[example_id]
+url_syntax: http://www.agbase.msstate.edu/cgi-bin/getEntry.pl?db_pick=all&database=UniProtKB/TrEMBL&uid=[example_id]_GOSHI&gb_acc=[example_id]
-url_example: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=881225
+url_example: http://www.agbase.msstate.edu/cgi-bin/getEntry.pl?db_pick=all&database=UniProtKB/TrEMBL&uid=Q8VWP8_GOSHI&gb_acc=Q8VWP8

← Older revision		Revision as of 19:11, 15 December 2011
Line 1:		Line 1:
	[http://www.agbase.msstate.edu/ AgBase]		[http://www.agbase.msstate.edu/ AgBase]
		+
		+	=Adding annotations for seed trichome terms to describe the development of cotton fibers=
		+
		+	=DbxRefs for Annotations=
		+
		+	Need to create stanza
		+
		+	maizeGDB example:
		+
		+
		+	abbreviation: MaizeGDB
		+
		+	database: Maize Genetics and Genomics Database
		+
		+	object: Anything with a MaizeGDB Object ID Number or Gene Model Name
		+
		+	example_id: MaizeGDB:881225
		+
		+	generic_url: http://www.maizegdb.org/
		+
		+	url_syntax: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=[example_id]
		+
		+	url_example: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=881225
		+
		+
		+
		+	abbreviation: AgBase
		+
		+	database: Maize Genetics and Genomics Database
		+
		+	object: Anything with a MaizeGDB Object ID Number or Gene Model Name
		+
		+	example_id: MaizeGDB:881225
		+
		+	generic_url: http://www.maizegdb.org/
		+
		+	url_syntax: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=[example_id]
		+
		+	url_example: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=881225