CRIBI- Grape Genomics

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CRIBI

Interdepartmental Biotechnology Centre of the University of Padua

10-4-11:

abbreviation:GG

database: Grape Genome Database

description: Grape Genome Database

object: Locus identifier

example_id: GG:VIT_10s0116g00060

local_id_syntax:

generic_url: http://genomes.cribi.unipd.it

url_syntax: http://genomes.cribi.unipd.it/cgi-bin/pqs2/report.pl?gene_name=[example_id]&release=v1

url_example: http://genomes.cribi.unipd.it/cgi-bin/pqs2/report.pl?gene_name=VIT_10s0116g00060&release=v1

url_example: !url_syntax:



Re:email discussion of annotation files (10-10-11)

example: VIT_10s0003g05820- has different set of PO annotations on their site.


Annotations in file "gg_anatomy.assoc2" to fruit valve which are derived by IEA to TAIR:Locus:2198621. This is actually a TAIR "accession #"

see link to: AT1G20140





http://genomes.cribi.unipd.it/cgi-bin/pqs2/report.pl?gene_name=VIT_10s0116g00060&release=v1

Link for Grape Genome Site: Grape Genome

Link on the Grape Genome site to query site Ontologies

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