AgBase
From Plant Ontology Wiki
Jump to navigationJump to searchThe printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.
Adding annotations for seed trichome terms to describe the development of cotton fibers
- seed trichome (PO:0004511)
- petal (PO:0009032)
- root (PO:0009005)
- anther (PO:0009066)
- vascular leaf (PO:0009025)
- seed trichome development stage (PO:0025369)
- seed trichome elongation stage (PO:0025371) [38]
- seed trichome initiation stage PO:0025371 [17]
- seed trichome secondary wall biosynthesis stage (PO:0025372) [4]
- embryo stage (PO:0007631)
- endosperm development stages (PO:0007633)
- anther developmental stages (PO:0001004)
- leaf development stages (PO:0001050)
- root development stages (PO:0007520)
- petal differentiation and expansion stage (PO:0007611)
DbxRefs for Annotations
Need to create stanza
maizeGDB example:
abbreviation: MaizeGDB
database: Maize Genetics and Genomics Database
object: Anything with a MaizeGDB Object ID Number or Gene Model Name
example_id: MaizeGDB:881225
generic_url: http://www.maizegdb.org/
url_syntax: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=[example_id]
url_example: http://www.maizegdb.org/cgi-bin/id_search.cgi?id=881225
abbreviation: AgBase
database: AgBase
object: Anything with a Uniprot Gene Name or GenBank ID or GO ID
example_id: AgBase:Q8VWP8
generic_url: http://agbase.msstate.edu/index.html
url_syntax: http://www.agbase.msstate.edu/cgi-bin/getEntry.pl?db_pick=all&database=UniProtKB/TrEMBL&uid=[example_id]_GOSHI&gb_acc=[example_id]