Cosmoss- Physcomitrella

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Adding Physcomitrella annotations to PO terms

PO-Physco Webex Meeting July 18th 2011- Annotations

Physco growth conditions mapped to EO

Questions and Issues Nov,2011

Helpful link to Cosmoss gene ID wiki

Physco on Phytozome

Go to:Background info on Physco biology and culture

Link to: Japanese Physcomitrella site

Initial meeting date: Sept 2010

  • We have been contacted by Stefan Rensing, University of Freiburg, Germany

re: setting up an ontology for bryophytes with a focus on the model moss Physcomitrella patens.

Ramona and Dennis responded to him with an explanation of why we chose the current structure. He responded:

'We will aim to setup bryophyte terms with regard to the new structure and (if possible) suggest terms that are broad enough to cover all land plants in the process.'

'FYI, the current, but now obsolete, PO-MO term mapping is at MossOntology wiki'

This site has a list of moss tissue and cell types, as well as life cycle/developmental stages that we could use a a guide for adding new terms.

Link to the thread on po-discuss mailing list: http://mailman.cgrb.oregonstate.edu/pipermail/po-discuss/2010-September/000035.html


Also see Cosmoss, the Physcomitrella patens resource site.

Background info on Physco biology and culture

PO_Physco Webex June 21, 2011

May 2011 Release includes new Physcomitrella terms

See: May_2011_Release_Page

-Added about 80 terms to the PO to accommodate the moss ontology terms

June 21st, 2011 PO-Physco Webinar:

For notes from the meeting: Plant_Ontology_Webinar-_May_2011_release

Other

Moss 2011 Meeting- PO presentation

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IN DISCUSSION